Mirounga leonina (Southern elephant seal): 118024376
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Entry
118024376 CDS
T07472
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
mlx
Mirounga leonina (Southern elephant seal)
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mlx04040
]
118024376 (SCN4A)
Ion channels [BR:
mlx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118024376 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
118024376
NCBI-ProteinID:
XP_034882181
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
MASSSLPTLVPLGPESLRPFTRESLAAIERRVQEEEARQQRNKQMEIEESERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSNPPSWSKHVEYTFTGIYTFESLIKMLARG
FCIDNFTFLRDPWNWLDFSVITMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
YGNDTWNGNDAWNGNDTWNGNGTWNSHESWASNSTFDWDAYISDEGNFYFLEGANDALLC
GNSSDAGHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAG
KTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQE
ELGKAKPAQALEGGEADGDPAHGKDCNGSLDTSLGEKGPPRQSCSADSAISDAMEELEEA
HQKCPPWWYKCAHKVLIWNCCTPWMKFKSIIHLIVMDPFVDLGITICIVLNTLFMAMEHY
PMTEHFDNVLTVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLA
NVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQ
LFGKSYKECVCKIAADCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLT
VFLMVMVIGNLVVLNLFLALLLSSFSADSLATSDEDGEMNNLQIAIGRIKWGIGFAKAFL
LGLLHGKILSPREIMLSLGEPGEPGEAGESAPEDEKKEPPPDEGDKDLKDNHILNHVGLV
DGSPPSIELDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDGKKPPQRLDGN
SSVCSTADYKPPEEDPEEQAEENPDGEQPEECFTEACVQRCPILYVDISQGRGKMWWTLR
RACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEML
LKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDIS
EVNNKSECENLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEE
QPQYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPQNKLQGMVYDCVTKQAFDITIMILICLNMVTMMVETDDQSQLK
VDILYNINMVFIIIFTGECMLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYF
VSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGM
SNFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPG
TSVRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFY
ETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILF
ALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRQH
LLKRTVKQASYMYRHSQDGSGDSGPEKEGLIATTMSKMYGHGNGNSGVPSTGEERGWTGD
TGPAIGFTPMSPSDAALPPSPPLGQTVRPGVKESLV
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccaccctggtgcctctgggccctgagagcctgcgccccttc
acccgggagtccctggcagccatagagcggcgggtgcaggaggaggaggcccggcagcag
cggaacaagcagatggagatcgaggagtctgaaagaaagccgcgcagcgacctggaggcc
ggcaagaacctgcccctcatctacggggaccccccaccggaggtcatcggcatccccctg
gaggacctggacccctactacagcgacaagaagaccttcatcgtccttaacaagggcaag
gccatcttccgcttctctgctacgcccgccctctacatgctgagccccttcagcatcatc
agacgctgcgccatcaaagtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcctgaccaactgtgtgttcatgaccatgagcaacccgccttcctggtccaagcacgtg
gagtacacattcacggggatctatacctttgagtccctcatcaagatgctggcccggggc
ttctgcattgacaacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcaccatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagacgattgtg
ggggccctgatccagtccgtgaaaaagctgtcggacgtgatgatcctcaccgtcttctgc
ctgagtgtctttgcgctggtggggctgcagctcttcatgggaaacctgaggcagaagtgc
gtgcgctggcccccgcccttcaatgacaccaacaccacgtggtacggcaacgacacgtgg
tacggcaacgacacgtggaacggcaacgacgcgtggaacggcaatgacacgtggaacggc
aatggcacgtggaacagccatgagagctgggccagcaactcgacctttgactgggatgcc
tacatcagtgacgaagggaacttctatttcctggagggtgccaatgacgccctgctctgt
gggaacagcagcgatgctgggcactgccccgagggttacgagtgtatcaaggctgggcgg
aaccccaactacggctacaccagctacgacacgttcagctgggccttcctggccctcttc
cgcctcatgacccaggactactgggagaacctcttccagctgacccttcgagctgctggc
aagacctacatgatcttcttcgtggtcatcattttcctgggctccttctacctcattaac
ctgatcctggcggtagtggccatggcgtatgcagagcagaacgaggccaccctggccgag
gatcaggagaaagaagaagagtttcagcagatgctggagaaattcaaaaagcagcaggag
gagctggggaaggccaagcctgcccaggctctggaaggcggggaggcagatggggaccca
gcccacggcaaagactgcaacggcagcctagacacatcgctgggggagaaggggcctccc
cggcagagctgcagtgcagacagcgctatctcagacgctatggaagagctggaagaggcc
caccagaagtgcccaccgtggtggtacaagtgtgcccacaaagtgctcatatggaactgc
tgcaccccatggatgaagttcaagagcatcatccacctgattgtcatggaccccttcgtg
gacttgggcattaccatctgcattgtgctcaacaccctcttcatggccatggagcattac
cccatgacagagcactttgacaacgtgctcactgtgggcaacctggtcttcaccggcatc
ttcacagcagagatggtactgaagctcatcgccatggacccctacgagtacttccagcag
ggctggaacatcttcgacagtatcatcgtcaccctcagcctggtggaactgggcctggcc
aacgtgcaagggctgtccgtgctccgctccttccgactgctgcgggtcttcaagctggcc
aagtcgtggccaacgctgaacatgctcatcaagatcatcggcaactcggtgggcgctctg
ggcaacctgacgctggtgctggccatcatcgtgttcatcttcgccgtcgtgggcatgcag
ctgtttggcaagagctacaaggagtgcgtgtgcaagatcgcggccgactgcagcctgccc
cgttggcacatgcacgacttcttccactccttcctcatcgtcttccgcatcctgtgtggg
gagtggatcgagaccatgtgggactgcatggaggtggccggccaggccatgtgcctcaca
gtcttcctcatggtcatggtcatcggcaacctagtggtcctgaacctcttcctggccctg
ctgttgagctccttcagtgccgacagcctggccacctcagatgaggatggcgagatgaac
aacctgcagatcgccattgggcgcatcaagtggggcattggctttgccaaagcctttctc
ctgggactgctgcacggcaagatcctgagccccagggaaattatgctcagccttggggag
cccggggagcctggggaggccggggagagcgccccagaggacgagaagaaggagccgccg
cccgatgagggcgacaaggacctgaaggacaatcacatcctgaaccacgtgggcctggtt
gacggctctccccccagcatcgagctggaccacctcaacttcatcaacaacccctacctg
accattcacgtgcccatcgcctccgaggagtccgacctggagatgccaacggaggaggag
accgacactttctcagagcctgaggatggcaagaagccaccgcagcgcctcgatgggaac
tcctccgtctgcagtaccgccgactataagccccccgaggaggaccccgaggagcaggct
gaagagaaccccgatggggagcagcctgaggagtgctttacggaggcctgcgtgcaacgc
tgccctatcctctacgtggacatctcccagggccgtgggaagatgtggtggacactccgc
agggcctgcttcaagattgttgagcacaattggttcgagaccttcatcgtgttcatgatc
ctgctcagcagcggagccttggccttcgaggacatctacatcgagcagcggcgagtcatc
cgcaccatcctggagtacgcggacaaggtcttcacctacatcttcatcctggagatgctg
ctcaagtgggtggcctacggcttcaaggtgtacttcaccaatgcctggtgctggctcgat
ttcctcattgtggatgtctccatcatcagtctggtggccaactggctgggctactcggag
ctgggtcccatcaaatccctgcggacgctgcgggccctgcgtcccctgagggcgctgtcc
cgatttgagggcatgagggtggtagtgaatgccctcttgggagccatcccctccatcatg
aatgtgctgcttgtctgcctcatcttctggctcatcttcagcatcatgggtgtcaacctg
ttcgccggcaagttctactactgcatcaataccaccacctctgagaggtttgacatctcc
gaggtcaacaacaagtccgagtgtgagaacctgatgcacacaggccaggtccgctggctc
aacgtcaaagtcaactatgacaacgtgggtctaggctacctctccctcctgcaggtggcc
accttcaagggctggatggacatcatgtatgcggccgtggactcccgggagaaggaagaa
cagccccagtatgaggtgaacatctacatgtacctctattttgtcatcttcatcatcttt
gggtccttcttcaccctcaacctctttatcggcgtcatcatcgacaacttcaaccagcag
aagaagaagttcggagggaaagacatcttcatgacggaggaacagaagaaatactacaat
gccatgaagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaag
ctccagggcatggtgtacgactgcgtgaccaagcaggcattcgacatcacgatcatgatc
ctgatctgcctcaacatggtcaccatgatggtggagacggacgaccagagtcaactcaaa
gtggacatcctgtacaacatcaatatggtcttcatcatcatcttcaccggcgagtgcatg
ctcaagatgctcgccctgcgccaatattacttcaccgtcggctggaacatcttcgacttc
gtggtcgtcatcctgtccatcgtgggcctcgcactctccgatctgatccagaaatacttc
gtgtcccccacactgttccgagtgatccgcctggcccggatcgggcgtgtcctgcggctg
atccgtggggccaagggcatccggactctgctcttcgccctcatgatgtccctgccggcc
ctcttcaacatcggcctcctcctcttcctggtcatgtttatctactccatcttcggcatg
tccaactttgcctacgtcaagaaggagtcgggcatcgatgacatgttcaactttgagact
tttggcaatagcatcatctgcctcttcgagatcaccacgtcggctggctgggacgggctc
ctcaacccgatcctcaacagcgggccccccgactgtgacccgacactcgagaacccgggc
accagcgtcaggggtgactgtggcaacccctccatcggcatctgcttcttctgcagctac
atcatcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttc
aacgtggccaccgaggagagcagcgagcccctcggcgaggacgacttcgagatgttctac
gagacatgggagaagttcgaccccgacgccacgcagttcattgcctacagccgcctctca
gacttcgtggacaccctgcaggagccgctgaggatcgccaagcccaacaagatcaagctc
atcacgctggacctgcccatggtgccgggggacaaaatccactgcctggacatcctcttt
gccctcaccaaggaggtcctgggcgactctggggaaatggacgctctcaaggagaccatg
gaggagaagttcatggccgccaacccctccaaggtctcctacgagcccatcaccaccacc
ctcaagaggaagcacgaggaggtgtgtgccatcaagatccagagggcctatcgccagcac
ctgctcaagcgcacggtgaagcaggcgtcctacatgtaccgtcacagccaggacggtagt
ggggacagtggcccggagaaggagggcctgatcgccaccaccatgagcaagatgtacggc
cacgggaatgggaacagcggcgtgccgagcacgggtgaggaaaggggctggacaggggac
accggacctgccattgggttcacgcccatgagcccctcggatgctgccctccctccctcc
ccacccctggggcagacagtgcgcccgggggtcaaagagtctcttgtctag
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integrated database retrieval system
