Mirounga leonina (Southern elephant seal): 118024985
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Entry
118024985 CDS
T07472
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mlx
Mirounga leonina (Southern elephant seal)
Pathway
mlx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118024985 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlx03041
]
118024985 (EFTUD2)
Spliceosome [BR:
mlx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
118024985 (EFTUD2)
Complex C
U5 SnRNP specific factors
118024985 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
118024985
NCBI-ProteinID:
XP_034883193
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttgggaattatattggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgatgacgat
gacgacgatgatgtaggagaccatgatgaggaccaccctgggatggaggtcgtgctacac
gaggacaagaagtactaccccacagctgaggaggtgtacggccctgaggtggagaccatc
gttcaggaagaagacacccagcctctcaccgaacctattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtgtatgaaatggatttcttggca
gatctgatggataactcggaactcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgc
tatgaccaagatctgtgctatactgacattctcttcacagaacaagagagaggtgttggc
atcaaaagcactcctgtgacggtggtcttgccagataccaaaggaaaatcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacggctggcttgcgc
atctcagatggagttgtcctttttatcgatgctgctgaaggcgtgatgctgaacaccgag
cgactgatcaagcacgcagtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctcaaactgcctcccaccgatgcttattacaagctgcggcac
atcgtagatgaggtcaatgggctcataagcatgtattccacggatgagaacctgatcctt
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacacctttggtgacattaactaccaggaatttgct
aaaagactctggggtgacatttatttcaaccccaaaacacgaaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcccctttataagatc
cttgctcaggttgtgggtgacgtggacaccagcctccccaggactctggacgagcttggc
attcacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtctgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcacatcccctct
ccaaaggtgggcgccaagcccaagatagagcacacctacaccggtggtgtggattctgat
ctcggcgaggccatgagcgactgtgaccccgacggtcccctgatgtgccacactaccaag
atgtacagcacagatgatggagttcagtttcatgccttcggccgggtgctaagtggcacc
atccacgctgggcagcctgtgaaggtattgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctctggatctctgtggccaggtaccatattgag
gtgaatcgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaaccccggggcaatgaggaggctcagattttccggcccctg
aagttcaacaccacatctgttatcaagattgctgtggaaccggtcaacccctcagagctg
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggggagcacgtgattctgggtactggggagctctacttggactgtgtg
atgcacgacttgcggaagatgtactcagagatcgacatcaaggtggctgaccctgttgtc
acgttttgtgagacggtggtggaaacatcttccctcaagtgctttgctgaaacgcccaat
aagaagaacaagatcaccatgattgccgagccacttgagaagggcctcgccgaggacata
gagaacgaggtggtccagatcacctggaacaggaagaaactgggagaattctttcagacc
aagtacgattgggatctgctggctgcacgttccatctgggctttcggccctgatgccacc
ggccccaacatcctggtggatgataccctgccctctgaggtagacaaggctcttcttggt
tcagtgaaggacagcatcgttcaaggtttccagtggggaacccgggaggggcccctctgt
gatgagctgattcgaaatgtcaagtttaagatcctcgatgcagtggttgcccaggagccc
ctgcaccggggcgggggccagatcatccccacggcaaggagagtcgtctattctgccttc
ctcatggccactcctcgcctgatggagccttactactttgtggaggtccaggcccctgcg
gattgtgtctctgctgtgtacactgtcctggccaggcgcagggggcacgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccctgccattgattct
tttggctttgagactgatctgcggactcacacccaagggcaggccttttccttgtctgtc
ttccaccattggcagattgtacctggcgatcctctggacaagagcattgtcatccgcccc
ctggagccacagcctgctcctcacctggcccgggaattcatgatcaaaacccgtcgcagg
aagggcctgagtgaggatgtaagcatcagcaagttcttcgatgatcccatgttgctggaa
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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