Methanococcus maripaludis DSM 2067: MMJJ_04490
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Entry
MMJJ_04490 CDS
T06430
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mmad
Methanococcus maripaludis DSM 2067
Pathway
mmad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMJJ_04490 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmad03400
]
MMJJ_04490 (pdg)
Enzymes [BR:
mmad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMJJ_04490 (pdg)
DNA repair and recombination proteins [BR:
mmad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMJJ_04490 (pdg)
Prokaryotic type
MMJJ_04490 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF123
HhH-GPD
HHH
RecR_HhH
GIY-YIG
HHH_5
DUF763
DUF7178
Csx1_CARF
Motif
Other DBs
NCBI-ProteinID:
AVB75866
UniProt:
A0A2L1CAG9
LinkDB
All DBs
Position
423548..424618
Genome browser
AA seq
356 aa
AA seq
DB search
MNDFDNNFIKFLDILDEKLKKDAVVDKISKNSNENERAFKILISTVISARTKDETTAKVS
KELFKKVKNPKDLVKISIDELETLVHPAGFYKTKAKNLKKLGEILIEKYNSNVPNSIEEL
VTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRWNYVDTESPENTEMELRKKLPKNY
WKKINNLLVVFGQETCSPIPKCDKCFSEIRKICPHYNSLNEIEKIYADFKFKKTPKTKIP
KDKGTYVLRIKMNSPKTILVGKREIKFKKGDYFYIGSAMGNSMNLYNRISRHLSDNKKKR
WHIDYLLEFSNVKEVNVTLGRFECDVSQRFNLVLDSIESFGCSDCKCKSHLYYIKP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattttgacaacaactttattaaatttttagatatcctggacgaaaaattaaaa
aaagatgccgtagttgacaaaatatctaaaaattcaaatgaaaatgagcgggcatttaaa
atactgatttctacagtgataagcgcgcgcacaaaagacgaaactaccgcaaaagtctca
aaagaattgtttaaaaaagtaaaaaacccaaaagaccttgttaaaatctctattgacgaa
cttgagacgttagtgcaccctgcaggattttacaaaacaaaggctaaaaatctgaaaaaa
ttaggagaaattttaattgaaaaatataattcaaatgttccaaattcgattgaagagctg
gtaacacttccgggagtcggtagaaaaactgcaaatctagtaatgactcttgcatttgac
gattatgcaatctgtgttgacactcacgttcataggattacaaatcgatggaattatgta
gatactgagtccccagaaaacacagaaatggaacttagaaaaaaacttcctaaaaactac
tggaaaaaaataaacaatttactcgtagtatttgggcaggaaacatgcagtccgattcca
aaatgcgacaaatgcttttctgaaattagaaaaatctgcccccattacaattcattaaat
gaaatcgaaaaaatttacgcggattttaaatttaaaaagaccccgaaaactaaaatcccg
aaggataaaggtacttatgtcttgagaataaaaatgaactctccaaaaaccattctcgtt
ggaaaaagggaaattaaatttaaaaaaggagattatttctacatcggttctgcaatgggg
aatagtatgaacctttataatagaataagccggcatttatcggacaacaagaaaaaaaga
tggcatattgattatttacttgaattttcaaatgtaaaagaagtaaacgtaacacttgga
cgttttgaatgcgatgtttcacagcggtttaatttagttttagattcgatagagtctttc
ggatgttcggattgcaagtgtaaaagtcatttatactacattaaaccctga
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