Methylophaga marina: GCM100_25410
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Entry
GCM100_25410 CDS
T09183
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mmaf
Methylophaga marina
Pathway
mmaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM100_25410 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmaf03400
]
GCM100_25410 (nth)
Enzymes [BR:
mmaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GCM100_25410 (nth)
DNA repair and recombination proteins [BR:
mmaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCM100_25410 (nth)
Prokaryotic type
GCM100_25410 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Ogg-HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BDZ74822
LinkDB
All DBs
Position
complement(2482702..2483358)
Genome browser
AA seq
218 aa
AA seq
DB search
MNQAQRRDFFATLKAHNPAPTTELHYSSPFELLIAVILSAQATDVGVNKATDKLYPIANT
PEQILALGVDGLKQYIKTIGLFNSKAENVIKTCRILIEQHNSQVPEDREALEALPGVGRK
TANVILNTVFKHPVIAVDTHIFRLSNRTGLAKGKTVKAVEDKLMKVVPKDYLLDAHHWLI
LHGRYVCLARKPKCDTCSVTQYCDYYRDQQRRQSRTAS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggctcaacggcgtgacttttttgctactttaaaagcacataacccggcacct
acaacggagcttcattactcttctccttttgagttactgattgcagtgattctgtcagct
caagcgacggatgtgggggtgaacaaagccacggacaaactatacccaatagcgaatacg
cctgagcaaattctcgccttgggagtggatggcttaaagcaatacatcaaaacgattggt
ttattcaacagcaaggctgaaaatgtcatcaagacctgtcgaattttaattgagcaacat
aacagtcaggtcccagaagatagggaagcactggaagccttacctggtgttggtcgcaag
accgctaacgttatcttaaacaccgtttttaaacaccctgtcattgccgtagacacgcat
atctttcgtttatctaacagaacagggctggcaaaaggaaaaacggttaaggcggtcgaa
gacaaacttatgaaagttgtcccgaaagactatctgttagatgcgcatcactggctaata
ttacatggccgctatgtgtgtctggcgcgtaaaccaaaatgtgacacctgctctgtcacc
caatattgtgactattaccgtgaccagcaacgtcgtcagtcacgaactgcatcataa
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