Methylocaldum marinum: sS8_1340
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Entry
sS8_1340 CDS
T05638
Name
(GenBank) PAS domain S-box
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
mmai
Methylocaldum marinum
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmai03021
]
sS8_1340
Enzymes [BR:
mmai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
sS8_1340
Transcription machinery [BR:
mmai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
sS8_1340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
PAS
PilJ
PAS_4
PAS_9
HATPase_c_2
PAS_8
DUF1499
PAS_11
Motif
Other DBs
NCBI-ProteinID:
BBA33300
UniProt:
A0A250KNN5
LinkDB
All DBs
Position
complement(1492267..1495029)
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AA seq
920 aa
AA seq
DB search
MEPQKLPSSPKTPTKVQGFFRESLTWALDQYGTVLGLLAMTAVVSYAVLIADLRSQEGSA
AALNLAGHERMLVERGLVLAMKMVNSEDRAERQAIRQQMVDTITQFENMHGYLKNGDRLI
RQGPRLLAEPGELAPELHLIYFEDPIKLDQHINRYIQAIRKLLSQPVGAVDPDDPNYRYL
VSNAPEQILSGLDKVVAHYQQNADFRLQNTQDLQGVMLAFFLFALAFGGMGLLNPLVKRL
KDSMANLQAQRDFNDNIINTAQALIIGLDPSGKITLFNRHAQEISGWLEDEVRGSEFFTN
FFAPDQQATMRALYEDVMQGGLSGETGTEIPMRIRSEELVDVIWHATVVRDQTSKQPVLC
LITGDDITERKRAEDRLQATLAELEKLSGRLQEEVNLAAALQHSILPAPDIVLPGVRGTA
SLNTSSEVGGDYYDYYKAGGCYAVLVIGDVSGHGVAAGTMVSAAKAGLYPLATEGVTRPA
EILRSLNETILATAHQSLLMTMGCLSLDSRTGHLRFANAGHVLPYLKRRGDRHWTMIEGG
GPPLGKSRDSDYLSVERELQLDIGDRIFLYTDGVVEQESLRGEPFGYDRLEAVLNENAEA
EPRVLEEKVIAALKAHSGRAHFEDDVTVAVLEHTDRVEVRTARDEDSAQLIRITEGFYRG
QSDHFTSPTTRQLVVFLSEGEFHDLLPRLSVDGIRRVLPRDDAFYHRLGWEHLLGQHQAS
PDDDIFCLVPGRIAERQFQLTHSDDKLFFMEEGRAWLEELGMVAPDQLESILLVLDEMVE
NSLYGAPRDGQSRPFYAKGTARDLSQNEHVRIHLAVGSDTIGLSVTDNWGTLTPAIFLNH
LTHTLAKGVEAGVGGAGLYLMWRMSDYLQVRVTPHRSTQITTLWDLSRPLQVGLKTGFQF
LYHSEHDEVVSHDSGRFTFH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggagccccaaaagcttccctcgtccccgaagacccccaccaaagtccagggttttttt
cgggagtctcttacctgggcgctggaccagtacggtaccgtgctgggcctcctggcgatg
acggccgtcgtgagctatgccgttctgatcgccgaccttcgcagccaggagggtagtgcc
gcagcgcttaacttggccggccacgagcgcatgctggtggaacgcggcctagtcctggcg
atgaagatggtcaactccgaagaccgtgccgaacgccaggcgatccggcagcagatggtc
gataccatcacccagttcgagaatatgcacggttatctcaagaacggcgatcgcctgatc
cgacagggaccgcgcctattggccgagccgggtgaactggcgccggagctccacctcatc
tatttcgaggacccgataaaactcgatcagcacatcaaccggtacatccaggccatacgc
aagctattgtcgcagccggtgggcgccgtcgatcccgatgatccgaactaccgatatctg
gtttcgaacgctccggaacaaatcctttccggtctcgacaaggtcgtggcgcattatcag
cagaacgccgacttccgtttgcagaatacccaggacctacaaggcgtgatgctggcgttc
ttcctgttcgccctggctttcggcgggatgggcttgttgaatccgctagtcaagcgtctc
aaggacagcatggccaacttacaggcccaaagagacttcaacgacaacatcatcaatacg
gcgcaggccctgatcatcggtctggaccccagcggaaagattaccctgttcaaccggcat
gcccaggaaatctccggctggctcgaggatgaagtgcgcgggagcgagttttttaccaat
ttcttcgcgcccgatcagcaggcaacgatgcgcgccttgtacgaggatgtcatgcagggg
ggactgtcaggcgagaccggaacggaaattcccatgcgcatccgcagcgaggaactggtg
gacgtcatctggcatgcaaccgtagtccgagatcagaccagcaagcagccggtcctgtgc
ctgatcaccggcgacgacatcaccgaacgcaagcgggcggaagatcgcctgcaagccacc
ctggcggaactggaaaagctgagtggtcgattgcaggaagaggtcaacctggccgcggct
ttgcaacactcgattctgcccgcgccggacatcgtgctgccgggggtgcggggtaccgcc
tcactgaacacgtccagcgaagtgggcggcgactattacgactactacaaggccggcggt
tgttacgccgttctggtgatcggtgatgtcagcggccatggcgtcgccgcgggtaccatg
gtgagcgccgccaaggccggcctttatccgctggcgaccgaaggcgtgactcgccccgcg
gaaattcttcgatccctcaacgaaaccattttggccacggcgcatcagtcgctgctgatg
accatgggctgtctgagcctggacagtcgtaccggccacctgcgtttcgccaacgccggg
cacgtgctgccttatctcaagcggcgcggggatcggcactggaccatgatcgaaggcggc
ggcccgcccctgggcaagagccgcgattcggactacctctcggtagagcgggaactgcaa
ctcgatatcggagaccggatcttcctttacaccgatggcgtggtagagcaggaatcgctg
cgcggcgagcccttcggctacgaccggctcgaagccgtcctgaacgaaaacgccgaggcc
gaaccgcgagtactggaagaaaaagttatcgccgcgctcaaggcccacagcgggcgcgcc
catttcgaagacgacgtgaccgtggccgtgctggagcacaccgaccgcgtggaagtccgg
accgcgcgcgatgaggattcagctcagctcatccgcattaccgaaggtttttaccgcggg
caaagcgatcactttacctcgccgactacgcgccagttggtggttttcctatcggaaggc
gagttccacgatctgttgccgcgcctcagcgtggacggtatccgcagggtgctgccccgc
gacgacgccttttaccaccggctcggctgggaacatctgctgggccagcatcaagcgtcg
ccggacgacgacattttctgtctggttcccggccgcatcgcggagcggcaattccagctc
acccacagcgacgacaagctgtttttcatggaggaggggcgtgcctggctggaagaactc
ggcatggtagcgccggaccaactcgagtccatcctgttggtgctcgacgaaatggtggag
aattccctgtacggcgcgccccgcgacggccagagccggcccttctacgcgaagggaacg
gcacgggatctgtcccagaatgagcatgtgcgcatccatctggcggtgggctcggacacc
atcggcctgtcggttaccgataactggggcaccttgaccccggcgatcttcctgaaccat
ctgacccatactctcgcgaaaggcgtcgaagccggtgtcggcggggctggcttatacctg
atgtggcgtatgtcggattatctgcaagtgcgcgtcaccccgcatcgctctacccagatc
accaccctatgggatctgagccggcccttgcaggtcggcttgaaaaccgggtttcaattc
ctctaccacagcgagcacgacgaggttgtaagccatgactctggcagattcactttccat
taa
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