Methylocaldum marinum: sS8_4639
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Entry
sS8_4639 CDS
T05638
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mmai
Methylocaldum marinum
Pathway
mmai00300
Lysine biosynthesis
mmai00550
Peptidoglycan biosynthesis
mmai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmai00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
sS8_4639
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
sS8_4639
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmai01011
]
sS8_4639
Enzymes [BR:
mmai01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
sS8_4639
Peptidoglycan biosynthesis and degradation proteins [BR:
mmai01011
]
Precursor biosynthesis
Amino acid ligase
sS8_4639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BBA36569
UniProt:
A0A250L2A9
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All DBs
Position
5023785..5025299
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AA seq
504 aa
AA seq
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MIAVETQTAGHTLDTLLSGFVETPASSLVNVMGLCHDSRRIRPGEGFVALAGHRSHGMRH
AEQAIRQGCSAIIYDPAGGGDLLARNIAALPCVKVDSLDQKLGFIADRFFGEPSAFQDVI
GITGTNGKTSCSHFLANALSAKAPAAVVGTLGWGVPGALEMTQHTTPDAIEVHGLLARLR
ERGIRIIAMEASSHGQVQGRLNGVRFKGALYTNFSRDHLDYHGTMEAYLEAKLRLLASPG
LEFVVFNADDPIADVISSRAPFQPRPIGFSVHGRNIVPDATVSVTSILQDSRGIAFRAVY
RQQATDVFAPVYGDFNVENLTASLAVLLGLGYELPEAAELLKNVRPVPGRMERFSGLGRT
AIVDYAHTPDALESVLRSLRRHCEGKLWVVFGCGGDRDRGKRPLMGAVAEKLADGVVLTD
DNPRSENGDEIIRDILSGCRRDNTVSIRDRRAAIAFALERAGMGDIVVVAGKGHEQTQEI
RGQKYPFCDREVVTEILSVLEWPR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgtcgaaacacagactgcggggcacacgctggacaccctattgtccgggttc
gtcgaaacccccgcttctagtctggttaatgtcatgggtctttgtcatgacagccggcgc
atccgcccgggcgagggcttcgtcgctctggccggacaccggtcgcacggtatgcgtcat
gccgaacaggcgattcggcaaggttgttcggccatcatctatgatccggccgggggcgga
gatctgctggcccgaaatattgccgcattgccttgtgtcaaggtcgattccctggaccaa
aaactcggattcattgctgatcgctttttcggcgagccttccgcattccaggacgtgatc
ggcatcaccggcacgaacggcaaaacctcatgcagccattttctcgccaatgcgctttcg
gccaaggctccggccgccgtcgtcgggactctgggttggggtgtgcccggtgcgctcgag
atgacgcagcacactacgccggacgccatcgaagttcacggtcttctggcccgcttgcgc
gagcggggcatcagaatcatcgccatggaagcttcgtctcacggtcaggtgcaaggccgt
ctcaatggcgtgcgcttcaagggggcactgtacacgaattttagccgcgatcatctggat
taccacggcacgatggaagcctatctggaggcgaagttgcgtcttttggcttcgcccggg
ctcgaattcgtggttttcaatgccgacgatccgattgccgacgtcatctcaagccgggcg
ccgttccaaccgaggccgataggctttagtgtgcatgggcgtaatatcgtgccggatgcc
accgtttcggtaacgtcgatccttcaggactcgcgagggattgcttttcgtgccgtgtat
cggcaacaggcgaccgatgtgtttgcgccggtctacggcgatttcaacgtcgaaaatctg
accgcttcattggcggtcttgctcgggttggggtacgaactgccggaagccgcggagttg
ctcaagaatgtccggccggtgccgggacgcatggagcgattttcggggctggggcgcact
gccattgtggattacgcccataccccggatgccctggaaagcgttttgcgcagccttcgc
cggcattgcgaaggcaaattatgggtggttttcggatgcggcggagaccgcgaccgcggc
aaacgtccgctgatgggggcggtcgcggagaaactggccgacggcgtcgtattgaccgat
gacaatcctcgctcggagaatggggacgaaattatccgggatattctgtccggttgccgc
cgcgacaataccgtttcgatccgcgatcgccgcgcagccatagcctttgcgctggagcgg
gcgggcatgggcgacatcgtggtggtggctggaaagggccacgagcaaactcaggagatt
cggggccagaaatatcctttctgcgatcgcgaagtggtcacggaaatcctttccgtgttg
gagtggccgagatga
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