Methanococcus maripaludis KA1: MMKA1_12240
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Entry
MMKA1_12240 CDS
T03692
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mmak
Methanococcus maripaludis KA1
Pathway
mmak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMKA1_12240 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmak03400
]
MMKA1_12240 (nth)
Enzymes [BR:
mmak01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMKA1_12240 (nth)
DNA repair and recombination proteins [BR:
mmak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMKA1_12240 (nth)
Prokaryotic type
MMKA1_12240 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
EndIII_4Fe-2S
RecR_HhH
DUF2400
DUF6615
AGOG
Motif
Other DBs
NCBI-ProteinID:
BAP61341
UniProt:
A0A2Z5PTU5
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All DBs
Position
1196277..1196924
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AA seq
215 aa
AA seq
DB search
MIKIQNFERIKIIMKRLHKYVKKPVGNTNPFRVLITTILSQRTRDENTDEAAATLFSVYK
TPEEIANAPRDEIEKLIKKAGFFRVKAQRVKETSRIIHEEHEDAVPDNIKELLALPGVGR
KTANCVLVYGFRKNAIPVDVHVHRISNRIGLVKTKTPEETELELTKIVPKKYWLDLNESF
VRFGQDICRPIGPKHEECPINDLCDFYRDMKKKSS
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaattcaaaactttgaaaggatcaaaataataatgaaaaggcttcacaaatac
gttaaaaagcctgtaggaaatacaaatccgtttagagtcctgattacaaccattttatct
cagagaaccagggatgaaaacacagatgaagccgcagcaactctcttttcagtctacaaa
acacctgaagaaatcgccaatgctcctcgtgatgaaatcgaaaaattaattaaaaaagcg
ggctttttcagggtaaaagcacaacgggtaaaagaaacttcaaggataatccatgaagaa
cacgaagacgccgttcccgacaatataaaagaacttttggcacttccaggagttggaaga
aaaactgcaaattgtgttttagtttatggatttagaaaaaatgcaattcctgtagatgtg
catgtacatcgaatatccaatcgaatcgggcttgtaaaaacaaaaactccagaggaaact
gagcttgaacttacgaaaatcgttccaaagaagtactggcttgatttgaatgagagtttt
gtgaggtttgggcaggatatttgccgaccgattggtccaaagcatgaagaatgtcctata
aatgatttatgtgatttttacagagatatgaagaaaaaatcttcttaa
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