Mycobacterium marseillense: CKJ54_01935
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Entry
CKJ54_01935 CDS
T05049
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mmal
Mycobacterium marseillense
Pathway
mmal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKJ54_01935 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmal03400
]
CKJ54_01935 (nth)
Enzymes [BR:
mmal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKJ54_01935 (nth)
DNA repair and recombination proteins [BR:
mmal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKJ54_01935 (nth)
Prokaryotic type
CKJ54_01935 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASW88791
UniProt:
A0AAC9VS42
LinkDB
All DBs
Position
384742..385443
Genome browser
AA seq
233 aa
AA seq
DB search
MVRRARRMNRALAQAFPDAHCELDFTTPLELAVATILSAQSTDKRVNLTTPALFKRYPSA
LDYAQADRAELENLIRPTGFFRNKASSLIGLGQALVERFEGEVPATMTELVTLPGVGRKT
ANVILGNAFGIPGITVDTHFARLVHRWRWTTDKDPVKIEHSVGELIERSEWTMLSHRVIF
HGRRVCHARKPACGVCLIAKDCPSFGLGPTEAPLAAALVKGPETEHLLALAGL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttggtgcgacgggcgcggcggatgaatcgtgcactggcacaagcgtttccggacgcgcac
tgcgaactggacttcaccacgccgctggagctggccgtcgccaccatcctgtccgcgcag
agcaccgacaagcgggtgaatctgacgacgccggcgttgttcaagcggtatccgtcggcg
ctggattacgcgcaagcggaccgcgccgaactggaaaatctcatccgcccgacgggattc
ttccgcaataaggcgtcctcgctgatcggtctcggccaggccctggtcgaacggttcgag
ggcgaggtgcccgccaccatgaccgaactggtcaccctgcccggcgtgggacgcaagacg
gccaacgtcatcctgggcaacgccttcggtatccccggcatcaccgtcgacacgcatttc
gcacggctcgtgcaccggtggcgctggaccacggacaaggatccggtcaagatcgagcac
tccgtcggcgagctcatcgagcgcagtgaatggacgatgctgagccaccgggtgatcttt
cacggccgccgggtgtgccacgcgcgcaaacccgcgtgcggcgtctgcctgatcgccaag
gattgcccctccttcggcctgggtcccaccgaagcgccgctggccgccgcgctggtgaag
ggcccggaaaccgagcacctgctcgcgctggccgggctgtag
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