Mycobacterium mantenii: MMAN_00970
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Entry
MMAN_00970 CDS
T07431
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mman
Mycobacterium mantenii
Pathway
mman03030
DNA replication
mman03410
Base excision repair
mman03420
Nucleotide excision repair
mman03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mman00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMAN_00970 (ligA)
03410 Base excision repair
MMAN_00970 (ligA)
03420 Nucleotide excision repair
MMAN_00970 (ligA)
03430 Mismatch repair
MMAN_00970 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mman03032
]
MMAN_00970 (ligA)
03400 DNA repair and recombination proteins [BR:
mman03400
]
MMAN_00970 (ligA)
Enzymes [BR:
mman01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MMAN_00970 (ligA)
DNA replication proteins [BR:
mman03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMAN_00970 (ligA)
DNA repair and recombination proteins [BR:
mman03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MMAN_00970 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMAN_00970 (ligA)
MMR (mismatch excision repair)
DNA ligase
MMAN_00970 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MMAN_00970 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
Auto_anti-p27
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BBY35963
LinkDB
All DBs
Position
75915..78008
Genome browser
AA seq
697 aa
AA seq
DB search
MSSAEADPVSPEVRRQWQDLAETVREHQFRYYIKDAPIVSDAEFDTMFNELVALEERHPE
LRVPDSPTQLVGGAGFATEFAEAQHLERMLSLDDVFDRDELVAWSNRVENEVGKEPYYLC
ELKIDGVALSLVYRDGRLERAATRGDGRVGEDVTLNARSIDDVPERLSADADFPVPALLE
VRGEVFFLLADFEALNASLVEDGKAPFANPRNSAAGSLRQKNPAVTARRRLRMICHGIGR
TEGFAPKTQHEAYAALNSWGLPVAAQTARVRGLAAVEERIGYWGEHRYDIDHEIDGVVVK
VDDVALQRRLGTTSRAPRWAVAYKYPPQEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG
STVGLATLHNAAEVKRKGVLIGDTVMIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE
CGTPLAPAKEGDADIRCPNARSCPAQLRERVFHVAGRGALDIEGLGYEAATALLKAGVIA
DEGDLFALTEDDLLRTELFRTKAGSLSANGRRLLDNLDKAKKVALWRVLVALSIRHVGPT
AARALATEFGDLDTIMSASTAQLAAVEGVGPTIAAALTEWFTVDWHRAIVDKWRAAGVRM
ADERDTSLRRTLEGLTVVVTGSLAGFSRDDAKEAILTRGGKAAGSVSKKTDYVVAGDSPG
SKYDKAIELGVPVLDEDGFRQLLAEGPPETPADQADE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcagcagaggctgatccggtatcgcccgaggtgcgtcggcagtggcaggacctg
gccgaaacggtccgcgaacaccagttccgctactacatcaaggacgcgccgatcgtctcg
gacgcggagttcgacaccatgttcaacgaactcgtggcgctcgaagagcgccacccggag
ctccgggtgcccgattccccgacgcagctggtcggcggagccggtttcgccactgagttc
gccgaggcgcagcacctggaacggatgctgagcctcgacgacgtcttcgatcgcgacgag
ctggtggcctggagcaatcgcgtcgagaacgaagtcggcaaggaaccgtattacctgtgc
gaactaaagatcgacggtgtcgccctgtcgctggtgtaccgcgacggccggctggaacgc
gcggccacccggggcgacggccgggtcggtgaggacgtgacgctcaacgcgcgcagcatc
gacgacgtccccgagcggctgtccgccgacgcggacttcccggttcccgccctgctcgag
gtgcgtggcgaggtgttcttcctgctcgccgatttcgaggcgctcaacgccagcctggtc
gaggacggcaaggcgccgttcgccaacccgcgcaacagcgcggccgggtcgctgcgccag
aagaaccccgccgtcaccgcccggcgcaggctgcgcatgatctgccacggcatcgggcgc
accgaaggattcgcacccaagacccagcacgaggcctatgctgcgctgaactcgtggggg
ctgccggtggcagcacaaaccgcacgggtgcgcgggctggccgccgtggaggagcggatc
gggtactggggcgagcaccgctacgacatcgaccacgaaatcgacggcgtggtagtcaaa
gtggacgatgtcgcgttgcagcgccggctcgggaccacctcgcgcgcgccgcgatgggcc
gtcgcctacaagtacccgccgcaggaggcacagaccaagctgctcgacatccgcgtcaac
gtggggcgcaccgggcgcgtcacaccgttcgcgttcatgacaccggtgaaggtggccggg
tcgacggtgggcctggccacgctgcacaacgccgccgaggtgaaacgcaagggcgtgctg
atcggtgacaccgtgatgattcgcaaggccggcgacgtgatcccggaggtgctcggtccc
gtcgtcgacctgcgcgatggctccgagcgcgaattcgtcatgcccacaacatgtcccgag
tgcggcaccccgctggcgccggccaaggagggcgacgccgacatccgctgccccaacgcc
cggtcctgtccggctcagctgcgggagcgtgttttccacgtcgccggtcgcggggccctc
gacatcgaggggttgggctacgaagcggccaccgcgctgctgaaggccggggtgatcgct
gacgagggcgacctgttcgcgctcaccgaagacgacctgttgcgcaccgagttgttccgg
acgaaggcggggtccctgtccgccaacggtagacggctgctcgacaacctggacaaggcc
aagaaggtggcgctgtggcgggttttggtggcgttgtcgatccggcacgtcgggccgacg
gccgcgcgcgccctggcgaccgagttcggtgacctggacacgatcatgtcggcgtccacc
gcacagctggccgcggtggaaggtgtcgggccgacgatcgccgcggcgctcaccgaatgg
ttcaccgtcgactggcaccgcgcgatcgtcgacaagtggcgcgccgccggcgtgcggatg
gccgacgagcgcgacaccagcctgcggcgcacgctggaggggctgacggtggtggtcacc
gggtcgctcgccggcttttcccgcgacgacgccaaggaggcgatcctcacgcgcggggga
aaggccgccggttcggtgtcgaagaagaccgactacgtcgtggccggcgattcgccgggt
tccaagtacgacaaggcgatcgagctgggggtgcccgtcctcgacgaggacggcttccgg
caactgctggccgagggtccccccgaaaccccggccgaccaagccgatgagtaa
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