Mycoplasmopsis maculosa: NCTC10168_00127
Help
Entry
NCTC10168_00127 CDS
T07105
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+))
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mmau
Mycoplasmopsis maculosa
Pathway
mmau03030
DNA replication
mmau03410
Base excision repair
mmau03420
Nucleotide excision repair
mmau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10168_00127 (ligA)
03410 Base excision repair
NCTC10168_00127 (ligA)
03420 Nucleotide excision repair
NCTC10168_00127 (ligA)
03430 Mismatch repair
NCTC10168_00127 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmau03032
]
NCTC10168_00127 (ligA)
03400 DNA repair and recombination proteins [BR:
mmau03400
]
NCTC10168_00127 (ligA)
Enzymes [BR:
mmau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC10168_00127 (ligA)
DNA replication proteins [BR:
mmau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10168_00127 (ligA)
DNA repair and recombination proteins [BR:
mmau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC10168_00127 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10168_00127 (ligA)
MMR (mismatch excision repair)
DNA ligase
NCTC10168_00127 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10168_00127 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
BRCT_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
ENCP4
TackOD1
Motif
Other DBs
NCBI-ProteinID:
VEU75211
UniProt:
A0A449B3N2
LinkDB
All DBs
Position
1:complement(131067..133049)
Genome browser
AA seq
660 aa
AA seq
DB search
MNNKDIKNKIKELTQKINYLNDEYYNKNNSLVSDLEYDKFLLELEELEAKYPNFILPDTP
TLKVGSLANSKFTKFIHEKPMLSLNKAYKYEDVQKYIDNILLSLPIEEINFSIEPKIDGL
SISLHYKKGKLVKAVTRGDGIEGEDVTENIYSIKELPKLINYSEDLELRGEVFFKKEDFL
NLNKELANNNSKTFANARNAASGTLRQLDSSIVEQRNLSLFLYELVNPEKHRIDSQIKAL
EFIKKLNIPTNPNSKLVELEDLEEEIQNFAEIKNELPYDADGLVIKLNNLNLWDKLGKTA
KFPKHSIAFKYEVETAISKITSIIATVGRTGKITYVAELNPVELNQTTVSRATLHNFNFI
KELNININDDVMIVKAGEIIPKVIKVINKNSNTFYNKILFCPSCKSELVEYSDIVDQFCL
NNDCRDKNINIISHFVDRKCLNIVGLAISTIKDLYPTFLKNIKDIYSLKEYKDELEKINR
FGKTKVNNLLKSIEESKKNKFDKVLFALGIKHLGQRAAKLIANNYSSFKDLIDDKDLIKI
KNIRNIGEKIIESILEFKNDQKNLDLMLFLDQNFEYEKKAINKSNLLNELSFVITGKLKN
PRDYYVELIENNGGKNLSSISSKTNYLILGEDAGSKKEKALSLNVKIITEEEFLKMINME
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaagatattaagaacaaaataaaagaattaactcaaaaaattaattattta
aatgatgaatattacaataaaaataattctttagtttctgatttagaatatgacaaattt
ttacttgaactagaagaattggaagctaaatatccaaattttattttaccggatactcct
acattaaaagtaggttcattagctaattcaaaatttacaaaatttattcacgaaaaacca
atgctttcattaaataaagcttataaatacgaagatgtgcaaaaatacatagataatatt
cttttatccttgccaattgaagaaataaattttagcattgaacctaaaattgatggatta
agcatatcactacattataaaaaaggtaaattagtaaaagctgttacaagaggagatggt
attgaaggcgaagatgtaacagaaaacatttactcaataaaagagttacctaaattaata
aactattcagaagatctagagttacgtggtgaagttttttttaaaaaagaagatttttta
aatttaaacaaagaacttgcaaataataattcaaaaacatttgctaatgcaagaaatgca
gcaagtggaacattgagacaacttgatagttctattgtagagcaaagaaatctttcctta
tttttatatgaattagttaatcctgaaaaacatagaattgatagccaaataaaggcatta
gaatttataaaaaaattaaatattcctacaaacccgaattctaaattagttgaattagaa
gacttagaagaagaaatacaaaattttgctgaaataaaaaatgaattaccttatgatgct
gatggcttagttattaagttaaataatttgaatctttgagataaattaggtaaaacagct
aaattccctaaacattctatagcttttaaatacgaagttgaaacagctattagcaaaata
acttcaataatagctacagtagggcgaacaggaaaaataacttatgttgcggaattaaat
cctgtcgaacttaatcaaacaacagtttcaagagctacattgcataattttaattttatt
aaggaattgaatataaatataaatgatgatgtaatgatagttaaagcgggggaaataatt
ccaaaagttataaaagttataaataaaaatagtaatactttttataacaaaattttattt
tgtccttcatgcaaaagtgaattagtagaatatagtgatatcgttgatcaattttgtctt
aataatgactgtagagataaaaatattaatattattagtcattttgttgacagaaaatgc
ttaaatatagttggtttagctataagcactataaaagatttatatcctacttttttaaaa
aatataaaagatatttattcattaaaagaatataaagatgaattagaaaaaataaataga
tttggaaaaacaaaagttaataatttattaaaaagtattgaagaatctaaaaaaaataaa
tttgataaagttctatttgctttaggaataaaacatttaggtcaaagagcagcaaaatta
atagcaaataattatagtagttttaaagatttaattgatgataaagatttaattaaaata
aaaaatataagaaatataggtgaaaaaataattgaatctattttagaatttaaaaatgat
caaaaaaatttagatttaatgttatttttagatcaaaattttgaatatgaaaaaaaagca
ataaataaaagtaatttattaaacgaattaagttttgttataactggaaaattaaaaaat
ccaagagattattatgttgaattaatagaaaataatggcggaaaaaatttaagtagcatt
agttcaaaaacaaattatttaattttaggtgaagatgcaggaagcaaaaaagaaaaggct
ctttctttaaatgttaaaattattacagaagaagaatttttaaaaatgattaatatggag
taa
DBGET
integrated database retrieval system
