Malurus melanocephalus (red-backed fairy wren): 130577580
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Entry
130577580 CDS
T09178
Symbol
RIGI
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04622
RIG-I-like receptor signaling pathway
mmea04623
Cytosolic DNA-sensing pathway
mmea05164
Influenza A
mmea05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130577580 (RIGI)
04623 Cytosolic DNA-sensing pathway
130577580 (RIGI)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130577580 (RIGI)
05168 Herpes simplex virus 1 infection
130577580 (RIGI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmea04054
]
130577580 (RIGI)
Enzymes [BR:
mmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130577580 (RIGI)
Pattern recognition receptors [BR:
mmea04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
130577580 (RIGI)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130577580
NCBI-ProteinID:
XP_057229040
LinkDB
All DBs
Position
Unknown
AA seq
926 aa
AA seq
DB search
MTAEEKRNLQCYRRYIERSLNPVYILSNMTDWLSDEIKERVRKEEEKGVTAAAALFLDAV
LLLEAEGWLRGFLDALVAAGYTGLAEAIETWDFSKLEKLELHRQLLKRIEATMIEIDPIA
LMPYINTCLIERECDEILQISEYRSKAAGITKLIECLCRSDKENWPKSLQLALDNAGYYN
ASELWNIGKDNGKDLDGEMTDASENYFETMVTFSEEAECDNLSENLSSVSEKVCEFSSVY
EPKKARSYQIELARPAIDGKNTLICAPTGSGKTFVSLLICEHHLQNIPPGQKAKVAFLAT
KVPVYEQQKNVFRQHFERSGYSVQGICGETVASIAVENVIQDSDIIVLTPQILVNSLEKG
ILSSLSIFTLMIFDECHNTTGNHPYNVLMTRYLDQKFDSSAHQLPQIVGLTASVGVGNAK
TTHETVEHICTLCSYLDVQAISTVRENKQDLQRFSNKPETHVRWVKMRAQNHFADIISDL
MSETEVLMRKIYSVDTISQINKTDFGTQKYEHWIVYTQKKCRLLQLEDKEKESSICRDLF
ICTEHLRKFNDALIISEDARIEDALAYLNEFFTNVKNGPYTELEKQLTDKFQEKEPELTA
LSKDESNENPKLEELACILDEAYRYNPQTRTILFAKTRALVAALKKWIEANPLLSHIKPD
MLMGKGRRDHKTGMTLPMQKGILDAFRKDKDIRLLIATSVADEGIDITECNLVVLYEYFG
NVTKMIQVRGRGRARDSKCIIVTSKSEVVENEKQNNYKEEMMNAAIEKLQNWDETTFART
IHDLQMKEKILRDCRKKETKPKAVEGKKNLLCGKCKAYVCSTDDIRIIKESHHTVLGDAF
KERYITKPHRKPIQFDGFEKKSKMHCRNTDCQHDWGITVKYKTFDNLPVIKIKSFVLENI
ETGTQMDIQKWKDINLSLKNFDETSS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaagcggaacctgcagtgctacaggcggtacatcgagaggagcctg
aaccccgtgtacatcctgagcaacatgacggactggctgtccgacgaaatcaaggagaga
gtccgaaaggaggaggagaagggggtgaccgcggccgccgcgctgttcctggatgccgtt
ctgctgctggaggcggagggctggctccggggcttcctggatgccctggtcgcmgcaggt
tacactggactggcagaagcaatcgaaacctgggacttcagcaaactggaaaaactggaa
ctgcataggcagctgttgaaacggatagaagcaacaatgatagaaattgatccaatagcg
ctcatgccatatataaacacatgcctgatagaaagggagtgtgatgagatcctgcagatc
agtgaatacagaagcaaagcagctgggataactaaactcattgaatgcctctgtcgctcg
gataaggaaaattggcccaaaagtcttcagctggcactggataaygcaggatattacaat
gcaagtgaactctggaatataggaaaagataatggcaaagatcttgatggtgaaatgaca
gatgcctctgagaactactttgaaaccatggtgacattttctgaagaggcagaatgtgat
aatctcagtgaaaatctctcttcagtttcagaaaaagtctgtgagttttcatctgtttat
gaaccaaagaaggctcggagctaccagattgagctggcacggcctgctattgatgggaaa
aacacactgatttgtgctcccacaggatctggaaaaacttttgtgtcacttcttatttgt
gaacatcatttacaaaacattccgccrggacaaaaggcaaaagttgccttccttgcaacc
aaagtgccagtgtatgaacaacagaaaaatgtattcaggcagcattttgaaagaagtgga
tattctgttcaaggaatttgtggtgaaacagttgcaagtatcgctgtagaaaatgttata
caggacagtgacatcattgtgctaacaccccagattcttgtgaatagyttggagaaaggg
atccttagctccctctccatcttcacactgatgatatttgatgagtgccacaacacaaca
ggcaaccacccttacaatgtattgatgaccagatacctggatcaaaaatttgactcctct
gcacaccagctgcctcagattgtaggtttaactgcttctgttggagttggtaatgccaag
accacccatgaaactgtagagcacatctgtaccctctgctcctaccttgatgtgcaggcc
atatccactgtcagagagaacaaacaagatctgcagagattcagcaacaagccagaaaca
catgtcagatgggttaaaatgcgagctcagaatcactttgcagacattatctcagatctg
atgtctgagacagaggtgttgatgaggaagatttactcagtggataccatctcccaaatc
aacaagactgattttggaacacagaaatatgaacactggatagtctacactcagaagaaa
tgcagactgttgcaactggaagataaggagaaggagagcagcatctgtagagaccttttc
atttgtactgaacatttgcggaaattcaacgatgctctcattatcagtgaagacgcccgc
attgaagatgctttagcctacctaaatgaatttttcacaaatgtgaaaaatggaccatat
acagaattagagaagcaactgacrgacaaatttcaagagaaagaaccagagctgactgcc
ctttcaaaagatgagtcaaatgagaatccaaagctggaggagcttgcttgcatcctggat
gaagcctaccgctataacccacagactcgcactattctctttgccaagacaagagcctta
gtagctgctttaaagaagtggatagaagcaaaccctctrcttagccacataaagccagat
atgttgatgggtaagggaagaagagatcataaaacaggtatgaccctgccaatgcagaag
ggtatactggatgcattcagaaaggacaaagacatcagactgctaattgctacatctgtg
gctgatgaaggcattgatattactgagtgcaaccttgtggtgctctatgaatactttggt
aatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaagagacagcaagtgcatc
attgtgacaagcaaaagcgaagtggttgagaatgaaaaacaaaacaattataaggaagaa
atgatgaatgcagctattgaaaagctacagaactgggatgaaacaacatttgcaagaacg
atacatgacctgcaaatgaaggaaaagatactacgrgattgcaggaagaaagaaacaaaa
cctaaagcagtggaagggaaaaaaaatcttctgtgtgggaaatgcaaagcatatgtttgc
agtacagatgacataagaattataaaggartctcatcacactgtcctaggtgatgcattc
aaggagcgttatataacaaagccccacaggaaaccaatccagtttgatggttttgagaaa
aaaagcaagatgcactgtcgaaatactgactgccagcatgactgggggatcacagtgaag
tacaagacatttgacaatctaccagtgatcaaaatcaaaagctttgtgctagagaacatt
gaaactgggacacaaatggatattcaaaaatggaaagatattaatttrtctttgaagaat
tttgatgaaacttccagctga
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