Malurus melanocephalus (red-backed fairy wren): 130578096
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Entry
130578096 CDS
T09178
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04010
MAPK signaling pathway
mmea04120
Ubiquitin mediated proteolysis
mmea04140
Autophagy - animal
mmea04144
Endocytosis
mmea04620
Toll-like receptor signaling pathway
mmea04621
NOD-like receptor signaling pathway
mmea04622
RIG-I-like receptor signaling pathway
mmea05132
Salmonella infection
mmea05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130578096 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130578096 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130578096 (TRAF6)
04140 Autophagy - animal
130578096 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130578096 (TRAF6)
04621 NOD-like receptor signaling pathway
130578096 (TRAF6)
04622 RIG-I-like receptor signaling pathway
130578096 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130578096 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
130578096 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmea04131
]
130578096 (TRAF6)
04121 Ubiquitin system [BR:
mmea04121
]
130578096 (TRAF6)
Enzymes [BR:
mmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130578096 (TRAF6)
Membrane trafficking [BR:
mmea04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130578096 (TRAF6)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
130578096 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
zf-RING_5
PspA_IM30
SlyX
Med21
RING_XB3-XBAT31
TRAF3_RING
Sina_ZnF
zf-RING_11
U-box
DUF16
Spc29
HAP1_N
UPF0242
DUF1664
DUF7607
HMMR_N
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
130578096
NCBI-ProteinID:
XP_057229936
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MSLLHSDSSCGARDVESGCCAAMASACSAGAKEESSSVGSGTGNTPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNKGCSMKMELRHLEDHQLQCDFSTVECLQCQGTFPKNYLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTAANPVPFLNGLRFEPPL
FSHVSHAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELRRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQNLKQRTFIKDDTLLVRCEVLTRLDLNSVRREGFQARS
TDGAM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacagtgacagcagctgtggagcccgagacgtggagagcggctgctgt
gcagccatggccagcgcctgcagcgccggagccaaggaggagagctccagtgtgggcagt
ggcactggcaacacgcccagctccttcacggaagaaacrcaaggatacgacgtggagttt
gatccgccactggaaagtaaatatgagtgtccaatctgtttgatggctctgcgggaagca
gtgcagacaccgtgtggccaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtcctgtagacaatgaaattctgcttgaaaatcaactttttcctgac
aactttgccaaacgggaaatcctttcattaacggttaagtgtcccaacaagggctgcagt
atgaagatggagctcaggcacttagaggaccatcagctgcagtgtgatttttccactgtg
gaatgcctgcagtgccaaggaaccttcccgaagaactatctgaaagaacacatgacccag
gagtgtccgaggcgtcaagtgtgttgccccaactgtgccacatctatggcctatgaagat
aaagagcttcatgaccaaacctgcccacttgccaatgtattttgtgaatattgcaacacg
gtgctcatcagagagcagatgcctaaccattatgacaatgactgtcctactgccccagtg
ccgtgtttttacagtgcctttgggtgtcctgaaaagatgcagaggaatgaactggcacga
catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcagaatatc
agtgttactgctgcaaaycctgtacccttcctcaatggcctacgctttgagcctcccctc
ttctcacatgtgtcacatgctgcatatgactgcaatccrgaagtggaaaacttcaaggaa
actattcagcagttggaaggtcgtctggtaagacaggatcatcaaatcagggaactcatc
gctaaaatggagactcagaacactcacatggcagaactcagacgtactatccgaaatttg
gagggaaagattacagaaatggaggcccagcaatgtaatggtatttatatctggaagatt
gagaacttcagtggactgcagaaagcccaggaagaagagagacccgtggtgatgcacagc
cctggcttctacacggggaagcctggctacaagctgtgcctgcgcctgcatatccagtta
ccaaacgctcagcgctgtgctaattttatctctctgtttgtccacactatgcaaggggaa
tatgacagccacctgccctggcctttccaaggcaccatacgaytgtctattttggatcaa
tcagaaggcccagaaaggcagaaccatgaagaggtgatggaagccaagccagagttgctg
gccttccagagaccgacaattcaccgcaatccaaaagggtttggttacgtgactttcatg
cacctgcagaacttgaaacagagaaccttcatcaaggatgacacgctcctggtgcgctgc
gaagttctgacgcgcctggacttgaacagtgtccgcagggaaggcttccaggcccgcagt
actgatggagccatgtag
DBGET
integrated database retrieval system
