KEGG   Malurus melanocephalus (red-backed fairy wren): 130579053
Entry
130579053         CDS       T09178                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mmea  Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130579053 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmea03041]
    130579053 (SMNDC1)
Spliceosome [BR:mmea03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130579053 (SMNDC1)
 Complex B
    130579053 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    130579053 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR DUF2067
Other DBs
NCBI-GeneID: 130579053
NCBI-ProteinID: XP_057231545
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNADNEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagttggccagctacaaagctcagctccagcaagtcgag
gctgccttatctgggaatgcagacaatgaggatttactgaaactgaagaaagacttrcag
gaagtcatagagttaaccaaagatctcctttcaacacaaccttcggaaactcttgcaagt
tctgacagttctgcgtccgccctgcccagtcactcatggaaggttggggataggtgtatg
gccatatggagtgaggatggacagtgttacgaggctgagattgaagaaatagatgaggag
aatggaacagctgcggttacatttgctggatatggcaatgctgaagtcacacctctgttc
aacctcaagcctgtggaagagggaagaaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgrgagtataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaaatggcaacaa
tttaacaacagagcctattctaaaaacaaaaaaggccaggtgaagaggagtatttttgct
tcccctgagagtgtaactggcaaggttggcgttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataacgtcaggcatttgatgcctcagtaa

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