Malurus melanocephalus (red-backed fairy wren): 130580086
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Entry
130580086 CDS
T09178
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130580086 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmea03000
]
130580086 (KDM2A)
04121 Ubiquitin system [BR:
mmea04121
]
130580086 (KDM2A)
03036 Chromosome and associated proteins [BR:
mmea03036
]
130580086 (KDM2A)
Enzymes [BR:
mmea01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
130580086 (KDM2A)
Transcription factors [BR:
mmea03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130580086 (KDM2A)
Ubiquitin system [BR:
mmea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130580086 (KDM2A)
Chromosome and associated proteins [BR:
mmea03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130580086 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130580086 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Ribosomal_60s
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
130580086
NCBI-ProteinID:
XP_057233340
LinkDB
All DBs
Position
Unknown
AA seq
1238 aa
AA seq
DB search
MAAAAPVRGQRRRRDLEEEDDDSSPGVSFSLSSEESEMEPEEERIRYSQRLRGTMRRRYE
DDGISDDEIEGKRTFDLEEKLSTNKFNSTFVVFMEGKDFTVEYIQRGGLRDPLIFRSSDG
LGIKMPDPDFSVNDVRLCVGSRRMVDVMDVNTQRDIEMSMAQWARYYETPEEEREKLYNV
ISLEFSHTKLENLVQRPATVDLIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMS
VKGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
ECQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSRSHLTKDFQKESLSMDMELSSSDSVNMEEEEEEEEDD
EDSAGKESRRPMTRRSILTSPIANGANVDYDELGKSCRSSLPGLKKTPSIDSSDSSRGSQ
NGQAWDPSGGSPRKSRKVHLTQFELEGLRCLVDKLESLPLHKKCVPTGIEDEDALIADVK
LLLEEYANSDPKLALTGVPIVQWPKRDKLKLQARLRVRLPTIPITKPHTMKPAPRPTPVR
STVSPIVSGARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRL
PHSVTCALCGEVDQNEDSQDFEKKLMECCICNEIVHPGCLQMDGEGLLNDELPNCWECPK
CYQGDDAEKGQKRKVEESDDDTAQAKVLRPLRSCEEPLTPPPNSPTPMLQLIHDPASPRG
VVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNPSGKKELSEVEKAKL
HGSYLTVTLQRPTKDVHGTSIVPKLQAITASSANLQHSPRVVVRHAPARMPLRSGGDEEA
AAEEEEEEEEEEDENAEEGGVARLNGRGGRAQEGEESCVQREVWMSVFRYLTRRELCECM
RVCKTWYKWCCDKRLWTKIDLSRCKSITPQALSGIIKRQPVSLDLSWTNISKKQLTWLVN
RLPGLKDLILAGCSWSAVCALSTSSCPLLRTLDLRWAVGIKDPQIRDLLTPPTDKPSKLL
LPWGWVGRTRDSHQDSLSTVSFSPRPGQDNRSKLRNMIDFRLAGLDITDATLRLIIRHMP
LLSRLDLSHCNHLTDQSANLLTAVGSSTRNSLTELNMAGCNKLTDQALLYLRRISNVTLI
DLRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggctcctgtaagaggacaaaggcgcaggagagacctggaggaagaggac
gacgacagcagtcccggcgtgtccttctcactctcttcagaggagtcggagatggagcct
gaggaagaacggatccgttacagccaaagactgcgtggcacaatgaggcggcgttatgag
gatgacggcatctccgacgatgagattgaagggaagaggacatttgaccttgaggaaaag
ctgtccactaacaagttcaactccaccttcgtggtcttcatggaaggcaaagacttcaca
gttgartacatccagcggggtggcctaagggacccactcatcttcaggagttcggatggc
ctggggataaagatgccagatccggacttcagcgtgaatgatgtgcggctgtgtgtgggg
agccgacggatggtggatgtgatggatgtgaacacgcagcgggacatcgagatgtccatg
gcacagtgggcacgctactacgaaacaccggaggaggagcgggagaagctctacaatgtc
atcagcctggagttcagccacaccaagctggagaacctggtgcagagacctgctacggtg
gatttgattgactgggttgataacatgtggcccaggcacctgaaggagagtcagacagag
tctaccaacgccatcctggaaatgcaatatccaaaggtgcagaaatactgtctgatgagt
gtcaagggctgctatacagatttccacgtggactttggtggcacttctgtgtggtaccat
atccaccgagggggaaagatcttctggctgatccctcccacaccccagaacctggagctc
tatgaaaactggcttctctcagggaagcagggagacattttccttggagacagagtatca
gagtgccagcgcattgaactcaagcagggctacacatttgtcatcccctcaggttggatc
catgctgtgtacactcccatggacacgctggtttttgggggcaactttttacacagcttc
aacatccctatgcagctccgcatctacagcatcgaggaccgcacacgggtcccaaacaag
tttcgttatcccttctattacgagatgtgttggtacgtgctggagcgctacgtgtactgc
atcaccagccgttcccacctgactaaggacttccagaaggaatccctcagcatggatatg
gagctgagctcctcagactcagtgaacatggaagaggaggaagaggaggaggaggatgat
gaggactcagcagggaaggaatcccggcgccccatgacccggcggtccattctcaccagc
ccaatcgccaacggtgccaatgtggactatgatgaactgggcaagagctgccggagcagc
ctgccaggtctcaagaagaccccatccatagactcttctgactccagccggggctcccaa
aatggccaggcttgggacccgagcgggggcagcccccgcaagagcagaaaggtgcacctg
acccagtttgagctggaggggctgcgctgcctcgtggacaagctggagtcactccctctr
cacaagaagtgcgttcccaccggcatcgaggacgaggacgccctcattgctgatgtcaag
ctgctgttggaagaatacgcraacagcgaccccaaactggcacttacaggcgtccccatc
gtccagtggcccaagagagataagctaaagctccaggcccggctgcgggtgcgcctgccc
accatccccatcaccaagccgcacaccatgaagccagcgccacgcccgactcccgtcagg
tccacagtgtctcccatcgtgtcaggtgcccggcgaaggcgggtgcggtgccggaaatgc
aaggcctgcatgcagggcgagtgtggcatgtgccactactgcagggacatgaaaaagttc
ggtgggcccggccgcatgaagcagtcctgtgtcctccggcagtgcttggcgcccaggctg
cctcactcggtcacgtgtgcactttgcggggaggtggatcagaacgaggactcacaggac
tttgagaagaagctcatggagtgctgtatctgcaacgagatcgttcaccccggctgtctg
cagatggatggggaagggctgctcaatgatgagctccccaactgctgggagtgccctaag
tgctaccagggtgatgaygcagaaaagggccagaagcggaaggtggaggagagcgacgac
gacacrgcgcaagccaaggtgctgcggcccctgcggagctgcgaggagcccctgacaccc
ccacccaactcrcccaccccgatgctgcagctgatccacgaccctgcatccccccgtggg
gtggtgacacgctcgtccccgggggccgggcccagcgaccaccacagcgccagccgggat
gagcgcttcaagcgccggcagctgctgcggctccaggccacagagagaaccatggtgcgg
gagaaggagaacaaccccagcggcaagaaggagctgtcagaggtggaaaaggccaagttg
catggctcctacctcaccgtgacgctccagcgccccaccaaagatgtccacggcacttca
attgtccctaagctccaagccatcacggcctcctcggccaacctgcagcactcgccacgc
gtggtcgtgcgccaygcgcccgccaggatgcccctgcggagcgggggcgatgaggaggcg
gccgctgaggaagaggaggaggaagaggaggaggaggacgagaacgcggaggaggggggg
gtggcccggctgaacgggcgtgggggccgggcgcaagagggcgaggagagctgcgtccag
cgcgaggtctggatgtccgtgttccgctacctcacccgcagggagctctgcgagtgcatg
cgggtgtgcaagacctggtacaagtggtgctgtgacaagagattgtggacaaagatagac
ttgagcaggtgcaagtccatcaccccccaggcactgagcggcatcatcaaaaggcagccg
gtcagcctcgacctcagctggaccaatatctccaaaaaacagcttacgtggctcgtcaac
aggctgccaggcctgaaagacctcatcytagcgggctgttcctggtctgcggtctgtgct
ctcagtacctccagctgcccccttctcaggaccctcgatcttcggtgggcagtaggaatc
aaggaccctcagatccgggacttactcacacctccyacagacaaacccagtaagctgctg
ctgccctggggctgggtggggaggacaagggacagtcatcaggacagtctgtccactgtc
agcttctctccccgtccaggtcaggacaatcgcagcaaactccgcaacatgatcgacttc
cggctcgctgggctggacatcacggacgccacgctgcgcctgatcatccgccatatgccc
ctgctctcccgcctcgacctcagccactgcaaccacctcacggaccagtcggccaacctc
ctcaccgccgtgggctcttccacacggaactccctcaccgagctcaacatggcaggctgc
aataagctgacagaccaggccttgttgtacctgcgccgcatctccaacgtcaccctcatc
gacctgcggggttgcaaacagatcactcgcaaagcctgtgagcacttcatctcggacctg
tccatcaacagcctctactgcctgtccgatgagaagctgatccaaaaaatcagctag
DBGET
integrated database retrieval system
