Malurus melanocephalus (red-backed fairy wren): 130585218
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Entry
130585218 CDS
T09178
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130585218 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmea03041
]
130585218 (EFTUD2)
Spliceosome [BR:
mmea03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130585218 (EFTUD2)
Complex C
U5 SnRNP specific factors
130585218 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
130585218
NCBI-ProteinID:
XP_057241592
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDELEDDDDDDDMGEHDEEHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgacgagtttgggaactacatcgggcccgagttggactcggac
gatgacgacgacgagctgggccgtgagtccaaagacctggacgagctggaggatgatgat
gatgatgatgacatgggggagcaygatgaggagcaccctggcatggaggtggtgctgcac
gaggacaagaagtactaccccacagctgaggaggtctacgggcctgaggtggagaccatc
gtgcaggaggaggacacgcagccactcactgagcccattattaaacctgtgaaaaccaag
aagttctctctgatggagcagacgctgcctgtcactgtctatgagatggatttcctggck
gatctgatggacaactcggagctgatccggaatgtgactctgtgtgggcaccttcaccac
ggcaagacrtgttttgttgactgcctgatagaacagacgcacccggaaatccggaagcgc
tatgaccaggatctctgytacactgacatattgttcacagagcaggagaggggcgtgggc
atcaagagcaccccagtgacaattgttctgccagacaccaaaggaaagtctttcctcttc
aacataattgacactccaggtcaygtgaatttttctgatgaggtgacagccggccttcgc
atctcggacggcgtcgtgctcttcatcgacgcggccgagggggtgatgctgaacacggag
aggctgatcaagcacgcggtgcaggagaggctggcagtgactgtgtgcatcaacaagatc
gacaggctgatcctggagctgaaactgcccccgacagatgcttactacaaactcagacac
attgtagatgaagtgaatgggctratcagcatgtattccactgacgagaacctcgtgctg
tctccccttctggggaatgtgtgcttctccagctctcagtacagcatctgcttcacactg
gggtcttttgcaaagatttatgcagacacatatggagacatcaattaccaggagtttgcg
aagcggctttggggcgacatctacttcaaccccaagacccgcaagttcaccaaaaaggcc
ccgacgagcagytcccagcgcagcttcgtggagttcattctggagcccctgtacaagatc
ttggctcaggttgtgggggacgtggacaccaccctgcccaggactctggatgagcttggc
atccacctgaccaaagaggagttgaaactgaacatccggccyctcctgcggctcgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacatcccctcr
cccaaggtgggggccaagacgaagatcgagcacacctacaccggcggcgtcgactccgac
ctgggcgaggccatgagcgagtgygaccccgatggtcccttgatgtgtcacaccaccaaa
atgtacagcaccgacgatggtgtccagttccatgcctttggcagggtgctcagtggcacc
atccacgctgggcagcctgtcaaggttcttggggagaactacaccctggaggatgaggag
gattcccagatctgcaccgttggacgcctctggatctcagtggcgaggtatcacattgag
gtgaacagggttcctgctggcaactgggtgctgatcgagggcgtggaccagcccatagtg
aagacagcgactgtgacagagcctcggggcaatgaggaggctcagatcttccgtcccttg
aagttcaacaccacatctgttatcaaaatagctgtggagccagtcaatccctccgagctg
cccaaaatgttggatggtctccgcaaagtcaacaagagctacccctcacttaccaccaag
gtggaagagtctggggagcatgtgatcctgggaacaggagagctgtacctggactgtgtg
atgcacgacctgcgcaagatgtactcygagatcgacatcaaggtggctgatccagtggtg
acattctgtgagacagtggtggaaacgtcctccctgaagtgctttgctgagacacccaac
aagaagaacaagatcacgatgattgctgagcccctggagaagggactcgccgaggacatc
gagaacgaagtggtgcagataacgtggaacaggaagaagctgggtgaattcttccagact
aagtacgactgggatttgctggctgcccgctccatctgggccttcgggccagatgccact
ggccccaacatcctggtagatgacacactgccctcagaggtggacaagtcacttctgggc
tcagtgaaggacagcatcgtgcaaggcttccagtgggggaccagggaagggcccctctgt
gatgaattgatccgcaacgtgaagttcaagatcctggaygcggtgattgctcaggagccc
ttgcaccggggtggagggcagatcatccccacagcccgcagagtcgtgtactctgccttc
ctcatggccacccctcgcctgatggagccctattatttcgtggaggtgcaggcccccgct
gactgcgtgtctgctgtgtacacggtgctggcccggcgcagaggccacgtgacacaggat
gctccgatcccaggctctcccctctacaccatcaaagccttcatcccagccatcgactcc
tttggctttgagacagatttgaggacccacacgcagggacaggccttctctctctctgtc
ttccaccactggcagatcgtgcctggtgaccccttggacaagagcatcgtcatccggccr
ctggagccacagccagccccacacttggccagggagttcatgatcaagaccaggcgtagg
aagggtctgagtgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ctggccaagcaagacgtcgttctcaactaccccatgtga
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