Malurus melanocephalus (red-backed fairy wren): 130586545
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Entry
130586545 CDS
T09178
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130586545 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmea03400
]
130586545 (TDG)
Enzymes [BR:
mmea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
130586545 (TDG)
DNA repair and recombination proteins [BR:
mmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130586545 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
LST1
Motif
Other DBs
NCBI-GeneID:
130586545
NCBI-ProteinID:
XP_057243355
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MFTFCLVXQKVSRLEINDVSSSPSLRYYAYLQQAPAFYSFPFHQMMTAVPNMEMTTEQPT
PEGIPEPNIAQEPPKEVKKGGRKRKAKATEPKQPKKXAAKKEKPAKSKGKQEKITDTFKV
KRKVDRFNGVTEAELLTKTLPDILTFDLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLF
MSGLSKEQLNHMDDHTLPHKYGIGFTNMVERTTPGSKDLSNKEIREGGRILMQKLQKYKP
RIAVFNGKCIYELFSREVFGIRVKNMEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQD
KVHYYIKLKDLRDQLKGIAPNTEVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGG
AYCDRAPYDSEQCSFSSNGTAGSNPQYCEGSSLGEVANGQWMPQSFAEQIPEFSAAVTXE
EEGSSV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtttacattctgtttggtaygtcagaaggtttctagattggagataaatgatgtctct
tcttctccctctctaagatactacgcataccttcagcaagctccagcattttactcgttt
ccgttccatcagatgatgactgcagtgcccaacatggaaatgaccacggagcagccgact
cctgagggcattccagarccaaacattgctcaggagcctccaaaagaagttaaaaaagga
ggaaggaaaagaaaagccaaagcaactgagccaaagcaacctaaaaagyctgctgctaaa
aaagaaaaaccagccaagtcaaaaggcaaacaagaaaagatcacagatacttttaaagtc
aaaagaaaagtggaccgttttaatggtgtaactgaagctgaacttctaaccaagactttg
cctgatattttgacctttgatctggacattgtaataattggcataaaccctggcctgatg
gcagcttacaagggacatcattacccaggacctggaaaccatttttggaagtgtctgttc
atgtctggcctaagtaaggaacaactgaaccatatggatgaccacaccttgccacataaa
tatgggattggatttacaaacatggttgaaaggacaacacctggaagcaaagacctctcc
aacaaagagattcgggaaggtgggcgaattctgatgcagaagctacaaaagtataaacct
cgtatagcagttttcaatggaaaatgtatttatgaactttttagtagagaagtttttgga
attagagttaagaacatggaatttgggctgcagccacacaaagtgccagatacagaaact
ctctgctaygttatgccatcgtccagtgccagatgtgctcagtttcctcgggcacaagat
aaagtgcattattacataaagctgaaagatttaagggatcarctgaagggcattgcaccc
aacacagaggtgcaggaggtgcagtacacatttgacctgcagcttgcacaagaggatgct
aaaaagatggctgtcaaagaggagaagtatgacccaggctatgaagcagcgtatggagga
gcttattgtgaccgtgcaccgtatgacagtgagcagtgcagcttctcttcaaatggaact
gcagggagcaatccccagtactgcgaagggtcgtccttgggtgaagttgctaatggccaa
tggatgccacagtcctttgcagagcagattccagagttcagtgctgctgtgacacrggaa
gaggagggaagcagcgtgtag
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