Malurus melanocephalus (red-backed fairy wren): 130589324
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Entry
130589324 CDS
T09178
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
mmea
Malurus melanocephalus (red-backed fairy wren)
Pathway
mmea04514
Cell adhesion molecules
mmea04520
Adherens junction
mmea04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130589324 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130589324 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130589324 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mmea01009
]
130589324 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mmea04515
]
130589324 (PTPRF)
Enzymes [BR:
mmea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130589324 (PTPRF)
Protein phosphatases and associated proteins [BR:
mmea01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130589324 (PTPRF)
Cell adhesion molecules [BR:
mmea04515
]
Immunoglobulin superfamily
Type II RPTP family
130589324 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Y_phosphatase
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
V-set
C2-set_2
Ig_5
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
130589324
NCBI-ProteinID:
XP_057246631
LinkDB
All DBs
Position
Unknown
AA seq
1543 aa
AA seq
DB search
MVPNCCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLDGQ
FQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGAQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTVEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSVDHETV
IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPP
KEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEE
FEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWEPPVLAERNGKIVNYTVVYRDINSQQD
LVNITKDTSITLTNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVEQVFAKNFRVNAV
MKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSS
AGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVPADQST
STLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKN
YKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMG
PVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGM
RDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIA
YDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATI
VMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTFALYKNGSSEKTEL
RQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCR
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaactgctgcatcccagtactcactgtgccagcagccatcctctgctgcttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaagctcctgaagatcag
attgggatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggtcatcgag
ttcgatgatgggtcaggatcagttctgcggatacaacccctgcgtgttcatcgtgatgaa
gctatctatgagtgcacagccaccaacagtgtgggggagataaacacgagtgccaagtta
acagtgttagaagaagaccacctcccagctggcttccccaccattgacatgggcccgcag
ctgaaggtggtggagaargcccgcacagccacaatgctctgtgctgccagtggtaaccct
gatcctgaaatctcctggttcaaggacttcctgcccgttgacactgcaaccagcaatggg
agaatcaagcaactccgctcgggagctctgcaaatagagaacagtgaggagtcagaccaa
ggcaaatatgaatgtgttgcaaccaacagcgcaggmacccgctactctgccccagccaac
ctttatgttcgagtgcggcgtgttgctcctcgattctctatccctccgagcaaccacgag
gtgatgcctggggggagcgtgaacctcacgtgcgtggcagtaggtgctccaatgccctac
gtgaagtggatggctggtgtggaggaactgaccaaagaagatgagatgcccgtcggcagg
aatgtcctggagctcaataacatcatgcagtcagccaactacacctgtgtggccatctct
tcccttggcatgatcgaagccacagcccagatcactgtcaaagcactgccaaaacctcca
accgagccattagtgactgaaacgacagctaccagcgtgaccctcacctgggattcgggc
aactctgaccccatttcatattatgtcatccagtacaagcccaaatccttggacggtcag
ttccaggaggtggatggtgtggcaacaacccgctatagcataggtgggctcagccccttc
tcggagtatgagttccgggtcattgcagtcaataacattggcaggggtccccccagtgaa
ctggtcgaggctcggacaggagagcaagctccttcaagtccccccctcaaagtccaggca
cggatgctgagcgccagcaccatgctggtgcagtgggagcagccagaggagcccaacgga
cagatccgagggtaccgcgtgtactacaccaccgacccgcacctgcctttgagcatgtgg
cagaaacacaacacggaygacagccacctcaccaccgtgggcagcctcatcacaggcacc
acctacagcatccgcgtcctggccttcacttcggtgggggacggacccccctcggacatc
atccaggtcaaaactcagcaaggggttcctgcccagccagctgacttccaggcagaagca
gagtctgatactcgcatcctgttgacgtggctgcctgcctcccaggaacgcattactaaa
tatgagctgctgtactgggaaggggaggatggcgctcagcaaaaggtggagtttgaccca
acctcctcttatgcagtggaaggtctcaaaccagacacattgtataagttccgtctggga
gcccgatcagagctgggggtcggagtttacacccccacggttgaagccagaactgcccaa
tccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccaccaccatc
cgggtaagttgggtgccaccgcccgcccagagccgcaatggggtcatcacccagtactcc
attgcctaccaggcagtggaaggagatgacaacaccaagcatgtggtggatggcattgga
cgggagcattccagctgggagatcaaggacctggagaagtggacggagtacaaggtgtgg
gtaagggctcacaccgatgtggggccaggaccggagagcatccccgtgcacgtgcgcact
gacgaggatgtgcccagtgccccaccacgaaaggtggaggtggagtctgtgaattcaact
gccatccgggtgagctggaagctgcccatctccaacaagcagcatgggcagatccgtggc
tatcaggttacctacgtgaagctggaaaacaaygagccccgagggcagccagtgatcaag
gacgtcatgctgtcagaagcacagtggagagctgaggactccgtcgaccatgagacagtc
attggaggcctrctgccagaaaccacctactccgtcacagttgctgcctacaccaccaag
ggagatggtgcccgcagcaagcccaaagtcatcaccaccacgggggcagtcccggggaag
cccaccatgatgattagcacgacagccatgaacacagccctcatccagtggcacccaccc
aaggagatggtaggggagctgctgggttaccggctgcagtacagacgtctggatgaggaa
aaaatgaacacgatagacttcggcaagagagaccatcactacactgtgaccaacctrcac
aagggggccacgtacctcttcaaattgtctgccaagaacagagctggcccgggagaggag
tttgagaaggagatcacgaccgctgaagacgtgccaagcggcttcccacagaacctgcgt
gtggtgggtctcaccacttccaccacagaggttgcttgggagcccccggtcttggcagaa
agaaacggcaagatcgtcaactacacagtggtatacagggacataaatagccagcaggac
ctggttaacatcaccaaggacacgagtatcactttgacaaatttgaaacctgataccact
tacgacatcaaagtgagggcccgcaccaataagggggctgggccactcagccccagcatc
cagtcccggaccatgcctgtagagcaagtgtttgctaagaacttccgtgtcaatgccgtc
atgaaaacgtctgtgttgctgagctgggaagtgcctgactcttataaatctgcagtgcct
ttcaagattctgtacaatagccagagtgtggaggtggatggccactcgatgaagaagctc
ataagtgacctccagccagacacggactattcttttgtgctaatgaaccgtgggagcagt
gcagggggactccagcacctcgtctcgatccgcactgctcctgatgtcttgcaaagcaaa
cccattgctacaaacaagtacatacaggaaggaaaattcacgctcactcttcccaaagtg
cagaccactgtgcctgttcggtggtactacatcgtggttgtgccagcagaccagagcacc
agcaccctgaccgctcggtggaggacgcctgatgagatggagctggaccagctgctggag
gccataagccaagggagtcagagcaggcggcagcgacgccaggcagacagactcaagccc
tacattgctgctcaagtggatgtgctgccygagaccttcaccctgggggacgagaagaac
tacaaaggtttctacaacaaacctctgtctcaagacctgagctatcgctgcttcgtcctg
gcctcgctggaggatggggacacgaagagatacgcagccagcccctactcggatgagatc
gtgatggaagtggcttcagcaaagcagcaggatgaacctgagatgctgtgggtgatggga
cccgtcctggctgtgatattaatcatcatcattgtcattgccatactcctcttcaaaagg
aaaagggcacactctccctcttccaaggatgagcactccatcggcctgaaggactcactc
ttggcccactcgtctgacccagttgagatgaggcggctcaactaccagactccaggcatg
cgtgatcacccccccatccccgtgaccgacctcgccgacaacatcgaccggctcaaggcc
aacgatgggctgaagttctcccaggagtatgagtccattgatccygggcagcagttcacc
tgggagaactccaacctggaagtgaataaacccaaaaaccgctatgcaaacgtgatagcc
tatgaccactcgcgtgtcatcctgacttccattgacggggtcccaggcagtgattacatc
aatgccaattacatcgatggctatcggaagcagaacgcctacatcgccacacagggaccg
ctgccagaaaccctcagcgacttctggaggatggtgtgggaacagagaacagcaactata
gtcatgatgaccaggctggaggagaagtccagggtaaagtgtgaccagtactggccaagc
cggggtacagaaacctatgggatgatccaggtgaccctgctggatacagtcgagctggcg
acctacaccgtccgcacctttgctctgtacaagaatggctccagtgagaagacagagctg
cgacagttccagttcatggcttggcctgatcatggggtcccagaataccccaccccaatc
ctcgctttcctgcgacgggtcaaggcctgtaacccaacagatgctgggcccatggtcgtg
cattgcaggtag
DBGET
integrated database retrieval system
