Methylophilus medardicus: FIU01_10700
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Entry
FIU01_10700 CDS
T10472
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
mmec Methylophilus medardicus
Pathway
mmec00300
Lysine biosynthesis
mmec00550
Peptidoglycan biosynthesis
mmec01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mmec00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIU01_10700
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FIU01_10700
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mmec01011
]
FIU01_10700
Enzymes [BR:
mmec01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FIU01_10700
Peptidoglycan biosynthesis and degradation proteins [BR:
mmec01011
]
Precursor biosynthesis
Amino acid ligase
FIU01_10700
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ApeC
Motif
Other DBs
NCBI-ProteinID:
QDC44945
UniProt:
A0A5B8CVJ4
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All DBs
Position
complement(2255976..2257406)
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AA seq
476 aa
AA seq
DB search
MSKYIIPAPVHGITADSRQVEKHGLFLAYPGQHSDGRDFIQDAIAKGANTVIWDNQGFDW
DPAWQVHNIAIADLKSQVGHIASQFYKEPSEQMWCIGVTGTNGKTTVTHWLAQAYRFLQQ
KAAVIGTLGNGALDDLQPTQNTTPGPVELQKMLATFVLDQVRTVAMEVSSHGLDQGRVNG
VAFDVAVLTNITRDHLDYHLTMEAYQAAKRKLFDWQTLTAAVINADDAFGLALIEDTRKQ
GKKVLSYGLHQEADVCATAVTMHATGFEIQVRTAQGTGEIQLHALGQFNVYNALAVLTCL
LAHDVALPAALQAVSGLVPVAGRMQMFGGGDLPLVVVDYAHTPDALEKALQTLRIQARGK
LSCVFGCGGDRDSGKRSEMGRIADALADSVVLTNDNPRSENPYAIIAAIAEGMTQEATVE
IDRAKAIALAVSQASKGDVVLVAGKGHEDYQEMQGIRYPFSDADWVQSALKKRAKA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaatacattattccagccccggtgcacggcatcacagcggatagtcgccaagtc
gaaaagcatggcttatttttggcttatcccggtcagcacagcgatggtcgcgactttatt
caagacgcgattgccaagggtgcaaataccgtgatttgggataatcagggctttgattgg
gatccagcttggcaagtacataacatcgccattgccgacctgaaatcgcaggtgggtcac
attgcgagccagttttacaaagagccttctgagcaaatgtggtgcatcggcgtcaccggg
acgaacggtaaaaccacggtgacacattggttggcacaggcctatcgatttttgcagcag
aaagcggctgtgatcggcacgttgggcaatggtgcactggacgatttgcagcccacgcaa
aataccacgccgggacccgtagagctgcaaaaaatgctcgccacctttgtgctggatcaa
gtgcgcactgtggcgatggaagtttcctcacatggactcgatcaggggcgggtgaatggg
gtggcgtttgacgtcgccgtgttgaccaacatcacgcgtgatcatctcgattaccacctg
accatggaggcctatcaggcggccaagcgcaaattatttgattggcaaacgctcacggcc
gcggtgattaatgcggatgatgccttcggtttggcactcatcgaagatacgcgcaagcaa
ggcaaaaaagtattgagttatgggctgcatcaggaggcggatgtctgtgcaacggccgtc
accatgcatgccaccggttttgaaattcaggtgcgtactgcacaaggcactggagaaatt
cagttacatgcgcttgggcaatttaatgtttacaacgcgttggcggtattgacctgcttg
ttagcacatgacgtggcattgccagctgcgttgcaagcggtatccggattggtaccagtg
gctgggcgcatgcaaatgtttggcggtggcgatttgcccttggtggtggtcgattatgcg
catacaccagatgccttagagaaggcgctgcagacgctacgtattcaagcccgtggcaag
ttgagctgtgtgtttggctgtggcggtgatcgcgatagtggcaaacgcagcgagatgggc
cgaatcgctgatgcactggccgatagcgtcgtgcttaccaatgataatccacgcagtgaa
aacccttatgcaattatcgccgcgatcgctgaaggcatgacacaggaagcgacagttgaa
atagatcgcgccaaagcgattgccttggccgtgagtcaggcaagcaaaggtgatgtggta
ttggtcgctggcaaaggccatgaggattatcaggaaatgcaaggcattcgctatccattt
agcgatgctgattgggtacaaagcgctctgaaaaagagggcgaaagcatga
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