KEGG   Mercenaria mercenaria (northern quahog): 123524374
Entry
123524374         CDS       T07835                                 
Name
(RefSeq) actin, cytoplasmic
  KO
K05692  actin beta/gamma 1
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03082  ATP-dependent chromatin remodeling
mmer04145  Phagosome
mmer04814  Motor proteins
mmer04820  Cytoskeleton in muscle cells
mmer05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    123524374
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    123524374
  09142 Cell motility
   04814 Motor proteins
    123524374
   04820 Cytoskeleton in muscle cells
    123524374
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    123524374
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mmer03021]
    123524374
   03019 Messenger RNA biogenesis [BR:mmer03019]
    123524374
   03036 Chromosome and associated proteins [BR:mmer03036]
    123524374
   03029 Mitochondrial biogenesis [BR:mmer03029]
    123524374
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mmer04812]
    123524374
   04147 Exosome [BR:mmer04147]
    123524374
Transcription machinery [BR:mmer03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     123524374
Messenger RNA biogenesis [BR:mmer03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     123524374
Chromosome and associated proteins [BR:mmer03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     123524374
    NuA4 complex
     123524374
  Chromatin remodeling factors
   BAF complex
    123524374
   PBAF complex
    123524374
   GBAF(ncBAF) complex
    123524374
   SWR1 complex
    123524374
Mitochondrial biogenesis [BR:mmer03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    123524374
Cytoskeleton proteins [BR:mmer04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     123524374
Exosome [BR:mmer04147]
 Exosomal proteins
  Proteins found in most exosomes
   123524374
SSDB
Motif
Pfam: Actin DUF6581
Other DBs
NCBI-GeneID: 123524374
NCBI-ProteinID: XP_045158456
LinkDB
Position
3:75185948..75192152
AA seq 376 aa
MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKS
YELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVL
SGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtctgacgaagatgttgctgctttggttgtagacaatggatccggtatgtgcaaggct
gggtttgccggcgacgacgccccaagagccgtatttccatccattgttggccgacccaga
catcagggtgtgatggtcggtatgggacagaaagacagctatgtcggtgatgaggcccag
agcaagagaggtatcctaacattgaaatacccaatcgaacacggtattgtcactaattgg
gacgatatggagaaaatctggcatcacactttctacaatgaactccgtgttgccccagag
gaacatcccgtacttctcactgaggccccgctcaaccccaaggccaacagagaaaaaatg
acccaaatcatgtttgaaacattcaacagcccagccatgtacgtcgccattcaggctgta
ctgtcactgtatgcttccggtcgaaccacgggtatagtgatggactccggtgacggtgtt
tcacacacagtgccaatctatgaaggttacgcccttcctcatgctattctgagattagat
cttgccggcagggatctcactgactacctcatgaaaattcttacggagcgtggttattct
ttcaccaccactgctgaaagagaaattgtaagagacattaaagaaaaactatgctatgtt
gctctagactttgaacaagaaatgcagaccgctgcttcatccagctcactggagaaaagc
tatgaactgcctgacggtcaggtcatcaccattggcaacgagcgtttccgttgcccagag
gccatgttccagccatctttccttggtatggaatccgcaggtatccatgaaacaacgtac
aacagcatcatgaagtgtgacgtcgacattcgaaaagatttgtacgcaaacaccgtgttg
tccggcggttccactatgttccccggtattgctgatcgtatgcaaaaggaaatcacagcc
cttgctccaccaaccatgaaaatcaagatcattgctccacctgagaggaaatactctgta
tggatcggcggctctatcctagcttcactgtccacctttcaacagatgtggatcagtaaa
caagaatatgacgaatctggaccctcaattgtacacagaaaatgtttctag

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