Mercenaria mercenaria (northern quahog): 123525714
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Entry
123525714 CDS
T07835
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123525714
Membrane trafficking [BR:
mmer04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123525714
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
123525714
NCBI-ProteinID:
XP_053394701
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All DBs
Position
3:63109971..63234649
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AA seq
1734 aa
AA seq
DB search
MTDHQFYHKWAMLMDPEDMSAGVKGYLKCDIAVIGKGDSVKVPPRTDKDDDDIEANLLLP
DGVPADRQRANFTVKIFRAEGLPKMNTGVMASVKKAFTGEGKDLVDPYVQVSFAGHKGKT
SVKKGSYEPHWNEQIVFSEMFPPLCRRIKIQLKDSHRVNDDIIGTHYIDLAKIENEGEKG
FVPTFGPSWINLYGSIRDYHVLGEHNHLNDGLGEGVSYRGRVLVSIKTDIMDAMEGGPAT
VEVEPTLPLPENATGRYEEYFLFGCILEASMIERKIGDKPVHFEMSVGNAGNVLDGYNPP
TKRDSSSDETSEEEDHEDHPDGSRPADAPKWHSTTPPLKPTTRDKVYYHLPFYEEKPCLY
VREMFEDHRRRMYNTNILEKIAEKLEDGIGEVNEMISQEQPFPEKRLRGVFEELGAACSK
FVSLVKGTGGGGSAGKTRLDKERHKLLVRELDQMSTLSRTMKATTAKSNLKDKIRSAMQY
LQKIKSLLQEPQHALPDIFIWLVSGNKRIAYQRIQARDIVYSIVDEECGKDCGKVKTLLL
KLPGKKASSQAGWSIQAKLQVYLWLGLSKHKKDYLNGLPRGYEECRVLKQSIKPQCVPPP
VINYTEKQVFQLRGHMYQARSLIGSDASGLSDPFARIAFGDQSVCTQVIEETLSPTWDEM
LIIHEVTMYGLMQEIAESPPTIIVEIFDQDKVGKSEFIGRALCKPVVKLSNEKYESPKFP
PSLEWWDIHRGPDRAGELLAAFELLQLAPFGDMGGQDLPPLKMPADSERQDRGPIMPVPK
GIRPILSKHRIEILFWGVRDLKRVQLTTVDKPRIDIECAGHVLQSAVILNCKKNPNFSVP
VKYFDVELPENELYCPPITIRCVDCRNFGRYVLVGTHVINSIHKFMYIPTTKKAKQALQK
LFPGKRPDAPHIIHTGPVSVKASDVAVNIDENFPLIKKETQITIDRGAQQKDKKTEENTR
RRRRRSTIDDDELDEEAMDWWSKYFVSMETLIMDPADKPEQEHDKKRGENYGGDPLDLDN
QITSLPTCPEEKNQSTTPYGAITNGDPKPPSPEDPDYNPKEAKKMEEELKKMEKKNEKKT
FKGTAKSVALASRLSPKSQRKKDALLSSTAQLKGISGYVNKAFSRKDEMDENERAHKAHI
RRFEVFPNELESQPEFNGFKDWLHTFELYRGKNMGNEVSDEGRIVGKFKGSLKIYKIPLP
ADIEDKTVTGGDPQLGLFQGLPGNEPIKVLVRVYVVKGNDLHPADMNGKADPYLVIRLGN
TTLNDKENYISKQLNPVFGKCFEIEATFPMESLLTVQVYDWDLVGMDDLIGETKVDLENR
YYSRHRATCGISKKFDVSGYNAWRDPVKPTQILSKLCKDGKVDGPHYQPGKVRVENRIFT
APIEDLEDEDGQRKSMDEHLALAVLNHWQEIPKVGCKLVPEHIETRPLYNPEKPGIEQGK
IEMWVDMFPMDMPAPPPAVEISPRKPKSYELRCIIWNTDDVVLEDDAFFTGEKMSDIYVK
GWIKGQEDMQSTDIHYRSLTGEGNFNWRFIFPFDYLVAEEKIVISRKETLFSWDETETKI
PARLNLQVWDADHFSADDFLGALTLDLNRFPRGAKSSKLCTLNMLKNDGSVPQMSLFKQK
RVKGWWPFAVKNEQTDELELTGKVEAEMHLFTSDEAEKHPAGQGRNEPDPLEKPNRPDGS
FIWFLNPLKSIRYILWHNYKWMIIKVLVILLLAALLVLFFYAMPGYTVKKMFNV
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcaccagttttaccataaatgggcaatgttgatggacccggaggacatgagt
gcaggggtcaaaggttatctcaaatgtgatattgctgtcattggcaaaggtgactcagtc
aaggttccaccaagaactgacaaagatgatgatgacattgaagccaatctgctgttacca
gatggagtacctgccgatagacaaagggcaaacttcaccgtgaagattttccgagcagag
ggtctgccaaaaatgaacacaggggtcatggccagcgtgaaaaaggctttcacaggggaa
ggaaaagatttagtagatccctacgtccaagtttcatttgctggacataaaggtaaaaca
agtgtgaagaaaggatcatacgagccacactggaatgaacagattgtgttctcggagatg
tttccaccattgtgtcggcgtatcaagatacagctgaaggacagtcacagagtcaacgat
gacatcataggaacacattatattgatcttgccaaaatagagaatgaaggagagaaaggt
tttgtaccaacattcggtccttcctggattaacttgtatggttctataagagattatcac
gtcttgggtgagcacaaccacctgaatgatggcctaggagagggtgtgtcctacaggggg
cgtgtcctagtatctatcaaaacagatattatggatgccatggaagggggtccagcaact
gtggaagtggaaccaactttgccattaccagagaatgcaactggtcgctatgaagagtat
ttcttgtttggctgcattttggaggcttccatgattgaaagaaagattggtgataaacct
gtgcattttgagatgagtgttggaaatgctggtaatgttctggatggttacaacccacca
accaagcgtgactcctctagtgatgagacctcggaggaagaggaccacgaagatcaccct
gatggatcaaggccagctgatgctccaaaatggcacagtacaactccacccctgaagcca
acaacgagagataaagtatattatcacctgccattttacgaggagaaaccatgtttgtat
gtgcgagagatgttcgaggatcacagacgcaggatgtacaacacaaatatacttgaaaaa
attgcagagaaactggaagatggaataggcgaagtgaatgagatgatatcacaagaacaa
ccattcccagagaaacgtttgcgaggtgtgtttgaggagttaggtgcagcatgttcaaag
tttgtctcccttgttaagggaacaggaggtggaggttcggctggtaaaacacgacttgat
aaggagcggcacaaattgttagttagggaactggaccagatgtctacgttgtcacgtacg
atgaaggccaccacagcaaagagcaacctgaaagacaaaatacgctcagcaatgcagtat
ttacagaagataaaaagtcttctgcaagagccacagcatgctctaccagatatatttata
tggttagtgagtggtaacaagcgaattgcctatcagaggatacaagctcgagatatcgtg
tactccattgtagacgaggaatgtggcaaagactgtgggaaggtcaaaactttgctcctc
aagttaccagggaagaaagcaagcagtcaagctggttggtcaatccaagccaaacttcag
gtatatctgtggttaggtctcagtaaacacaagaaagactatctgaatggtctacctcgt
gggtatgaggaatgcagggtccttaaacagtccataaaaccacagtgtgtgccaccacct
gtcataaattacacagagaaacaagtgttccagttgcgaggtcacatgtatcaggcgaga
agtctgattggctcagatgcctccggactttcagatccatttgctcgtatcgcatttggc
gaccagtctgtgtgtacgcaggtgattgaggagacgctcagtcctacgtgggatgaaatg
ttgattatacatgaagtaacgatgtacggactgatgcaggagatcgctgaaagtccgccc
acaatcattgtagagatttttgatcaggataaagtgggaaaatctgagttcattggccgt
gccctatgcaaaccagttgtgaaattgagtaacgagaaatatgaaagcccaaaattccct
ccgagtctggaatggtgggatatacacagaggccctgacagggctggtgaacttctcgca
gcttttgaacttcttcagcttgcaccatttggtgatatgggtggtcaggatttgcctccc
ttgaagatgccggcagactcagaacgccaggataggggtccaatcatgccagtgccaaag
ggtattagacctattcttagtaaacacagaattgagatacttttctggggtgttcgtgac
ttgaagcgtgtacagttaactacggtagacaagccacgtattgacatagagtgtgcaggg
catgttttacagtctgctgttatattgaattgcaagaagaatcctaatttcagtgtaccc
gtcaaatactttgatgttgaacttccggaaaatgagctgtattgtccacctataacaatc
agatgtgttgattgtcgtaactttggtagatacgtattagttggtacccatgtcatcaac
tccattcataaattcatgtatattcctacaacgaagaaagccaaacaggctttacaaaag
ctgttcccagggaagagacccgatgcacctcatattatacacacgggacctgtatcagtg
aaggcatcagacgtggcagtgaatattgatgaaaacttccctcttataaagaaggaaaca
caaattacaattgataggggagcacagcaaaaggacaaaaagacagaagagaatacaagg
cgtcgtcgcagacggtcaactatagatgatgatgaactagatgaagaagccatggattgg
tggagtaaatactttgtttccatggaaacgcttataatggatcctgcggacaaaccagaa
caggaacatgacaagaaaaggggagagaactatggcggtgaccctcttgacctcgacaac
cagattacatccctgccgacctgccctgaggagaagaatcagtctacgactccatacggt
gccataactaatggggatcctaaacctccgtcaccagaagatccagattataatcctaaa
gaggcgaaaaaaatggaagaagagctcaagaagatggagaaaaagaatgaaaagaaaacg
ttcaagggtactgctaaatctgttgcccttgcatcaagattgtcccctaaatcccaaagg
aaaaaagatgctttattgagttccacagcacaactgaagggtatatctggatatgtgaac
aaagcgttctctcgcaaagatgaaatggatgaaaatgagcgtgcacataaagctcacata
cgaagatttgaggtatttcccaatgagctggagagccaaccagaatttaatggattcaag
gactggttacatacgtttgagctgtatagagggaagaatatgggaaatgaagtttccgac
gaggggagaattgttggcaagtttaagggttcactgaaaatttacaagattcctctacca
gctgacattgaagataaaacagtgacaggtggtgatccacagttaggactctttcagggc
ctcccagggaatgagccaatcaaggttctagtcagggtctatgttgtgaagggaaatgac
cttcaccctgctgacatgaatggcaaagcagatccttacctggtgattcgcttggggaat
acaactttaaatgacaaggaaaactatatctccaaacagctcaacccagtgtttggaaaa
tgttttgaaatcgaggccacatttccgatggagtccttgttgacggtgcaggtttatgac
tgggatctagtggggatggatgacctgattggtgagaccaaagttgacctggaaaatcga
tattatagtcgtcatcgtgcaacctgtggaatctcaaaaaaatttgatgtgtcagggtac
aatgcctggcgcgatcctgtaaaaccaactcagattctatcaaaactatgcaaggatggt
aaggtggatggacctcattatcagccagggaaggttcgagttgagaacagaatatttaca
gcccctattgaggacctggaagatgaagatggtcagaggaagtcaatggatgaacatctg
gccctagctgtgctaaaccactggcaagagatccctaaagttggctgtaaacttgtacca
gagcacatagagacacgacccctgtataatccagagaagccaggcattgagcagggtaag
atagagatgtgggtagatatgttcccaatggacatgccggccccaccccctgcagtggaa
atcagtcccagaaagccaaaaagctatgagttacgctgcattatatggaacactgatgat
gttgtactggaagatgatgcatttttcacgggtgaaaagatgtcagacatatatgttaag
ggctggatcaaagggcaagaggacatgcagtctacagacatacattacaggtctttgaca
ggtgaaggcaactttaactggaggttcatttttccgttcgactacctcgttgccgaagag
aagattgtcatttcacgtaaagagaccttgttttcctgggacgagacggaaacaaaaata
ccagcgagactcaacttgcaggtctgggatgcagatcatttctcagcggatgattttctt
ggggcgttaactttagatctgaataggtttccaaggggagctaaatcttcaaagttgtgt
accctgaacatgctgaagaatgatggcagtgttccacaaatgtcgttattcaagcagaaa
cgtgtcaaaggctggtggccatttgccgtaaaaaatgaacagacagacgaactggaatta
acgggcaaagttgaagcagagatgcacctatttacttcagatgaggcagagaaacaccct
gctggtcagggaagaaacgagcccgatcctctagaaaagccaaatcgaccggatggatct
ttcatttggttcctgaatccattgaagtcaatccgctatattctttggcataactacaaa
tggatgatcatcaaagtactcgtcattttactcctagcggcacttcttgtgctgttcttc
tatgccatgccaggatacacagtgaaaaagatgttcaacgtttaa
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integrated database retrieval system
