Mercenaria mercenaria (northern quahog): 123526503
Help
Entry
123526503 CDS
T07835
Name
(RefSeq) TAR DNA-binding protein 43-like
KO
K23600
TAR DNA-binding protein 43
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123526503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmer03019
]
123526503
Messenger RNA biogenesis [BR:
mmer03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
123526503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
123526503
NCBI-ProteinID:
XP_053378720
LinkDB
All DBs
Position
14:19604554..19609609
Genome browser
AA seq
208 aa
AA seq
DB search
MMSKYIQVAEYENEESMEVPLEEDGTLLLSTLNAQFPGSCGLKYRNPESGAMRGIRLSDG
RLYPPDNEWSNRMYVAVFPKDGNKKKEDLTELSSAAALRIKRDRSVKCSDLIVLGLPWKS
VEDDLKKYFSQFGELLMVQVKKDPKTSHSKGFGFIRFADYDAQVKCMAQRHHIDGRWCDV
RIPNSKVVSEFYIPFCKTEGIHQVSIFL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaagtacattcaagtagccgagtatgagaacgaggagtcgatggaagtcccg
cttgaagaggacgggacgctcctgctgtccactctgaacgcgcagtttcctgggtcttgt
ggactgaaatatcgaaacccagaatctggtgcaatgcgcggtattcggctctcagacgga
cgcttgtacccaccggataatgaatggtcaaacaggatgtatgttgcagtatttccgaaa
gatggcaacaagaaaaaagaagatttaacggaactgtcatcagctgctgctttacgaata
aagagggatagatcagttaaatgtagcgacctcatagttctaggacttccatggaaaagt
gtggaagatgacctcaagaaatacttctctcagtttggtgaactgcttatggttcaggtg
aagaaggaccctaaaacttcccattcaaaagggtttggatttatccggtttgctgattac
gatgcccaggtgaagtgtatggcacagcgtcatcatattgatggtcggtggtgcgatgta
cggattccaaactccaaagtggtaagtgaattctacattccattttgcaaaactgaaggc
atacatcaagttagtatatttttataa
DBGET
integrated database retrieval system