KEGG   Mercenaria mercenaria (northern quahog): 123526503
Entry
123526503         CDS       T07835                                 
Name
(RefSeq) TAR DNA-binding protein 43-like
  KO
K23600  TAR DNA-binding protein 43
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    123526503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmer03019]
    123526503
Messenger RNA biogenesis [BR:mmer03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     123526503
SSDB
Motif
Pfam: TDP-43_N RRM_1 RRM_7
Other DBs
NCBI-GeneID: 123526503
NCBI-ProteinID: XP_053378720
LinkDB
Position
14:19604554..19609609
AA seq 208 aa
MMSKYIQVAEYENEESMEVPLEEDGTLLLSTLNAQFPGSCGLKYRNPESGAMRGIRLSDG
RLYPPDNEWSNRMYVAVFPKDGNKKKEDLTELSSAAALRIKRDRSVKCSDLIVLGLPWKS
VEDDLKKYFSQFGELLMVQVKKDPKTSHSKGFGFIRFADYDAQVKCMAQRHHIDGRWCDV
RIPNSKVVSEFYIPFCKTEGIHQVSIFL
NT seq 627 nt   +upstreamnt  +downstreamnt
atgatgagcaagtacattcaagtagccgagtatgagaacgaggagtcgatggaagtcccg
cttgaagaggacgggacgctcctgctgtccactctgaacgcgcagtttcctgggtcttgt
ggactgaaatatcgaaacccagaatctggtgcaatgcgcggtattcggctctcagacgga
cgcttgtacccaccggataatgaatggtcaaacaggatgtatgttgcagtatttccgaaa
gatggcaacaagaaaaaagaagatttaacggaactgtcatcagctgctgctttacgaata
aagagggatagatcagttaaatgtagcgacctcatagttctaggacttccatggaaaagt
gtggaagatgacctcaagaaatacttctctcagtttggtgaactgcttatggttcaggtg
aagaaggaccctaaaacttcccattcaaaagggtttggatttatccggtttgctgattac
gatgcccaggtgaagtgtatggcacagcgtcatcatattgatggtcggtggtgcgatgta
cggattccaaactccaaagtggtaagtgaattctacattccattttgcaaaactgaaggc
atacatcaagttagtatatttttataa

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