Mercenaria mercenaria (northern quahog): 123527491
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Entry
123527491 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123527491
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmer04054
]
123527491
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123527491
Pattern recognition receptors [BR:
mmer04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123527491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
DUF3324
Motif
Other DBs
NCBI-GeneID:
123527491
NCBI-ProteinID:
XP_045162911
EnsemblRapid:
LOC123527491
LinkDB
All DBs
Position
14:complement(51517641..51526497)
Genome browser
AA seq
1013 aa
AA seq
DB search
MRCAVDDLQKQVEGRILEYRSQICRVFRAPSVLRWMPSFFSAADEREIITVDLRNPEKAS
FLFIDKILKCTHVGKWTAFLEALKRADYPYLVSLLKFYDQDQDQCYHQKKILQIFAPYLE
LQLEPCDLIMHLNASHLINMRDMEEIMACQRNQGSVAATILLLDRIQRRQAPSRWYTDFL
KILYQKGFKDIVREMEPEFTLDCEILKLPNVIVTETKSDSAIEMDEIGNTVEEKIETKVK
YFQTEITELVRVEKIAPALCQLIGIEKVCQLMHVSRNSQKESIGSMLEEIGKLKNKTKWR
NFITCLKDSDYPHLADLLSRPRTSKLQCRERDLLRLFHSTLGEQLDPVDLITHLEKDNAI
NHRDKEEILSTVQQSGKTAASLVLIDCLQCRLAPTQWFRAFLNALVACDREDIVQTIHPD
YLKSHMSQTDDTLKEECGNEDNSSADNELVNRIDTAHCHIYKLEKTAKLELDKIQQHFDD
MKNSLCAQIENKTIAMSKTLEHVNTLAERESQEDISQEMEKCLQQVTTSCYTLCAAEPFM
NLEKLGVLHEPKQTLHRQSSLAISTKGSDSLKNCPKPSHGKHRVVDARSRHYSGSSSSSS
SSGYLIVEKSTSLSTSSITSIDERSQTKNASKVTFADSKESAQEIRDKKATKVDNSRLPS
RLIQNKDYLALYSKRKISPGRRRTVSESSILSTDASIVSSTDRPSSSATDALYDTSITSS
TTKTTSVSEKKVLVERTESYLYHHKMVISCNNNCLFSSLCVLPSNKTVLVDQGNGCFYIY
DDASNKFISRRLNHHIPICVCNVGDSLLFILFRRRDCTNVLVQYFIHFSTNPSPRRFVTG
ISFVKEVQVSSKCHGQLCSVASNNDGVLAFCSNKHIHYISTDGNETKTVNCDVVENEWWP
IYSIRDSGCEFAFMYEVYSCSVYCFCIFTGQMTWKVKLPHVEGMTLCGEGIYLSMNIDNK
IEILSKSTGNHERIITEHVRRPFAVSSSPGQDTIIVTQYHPKGNKINRMIKYF
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgtgctgtagatgatcttcaaaaacaagttgagggaagaatactggaatatagg
tcacaaatttgtcgtgttttcagggcaccaagtgtcttgcgatggatgcccagtttcttt
tctgctgcagacgaacgagaaataataacagtagatttaagaaatccagaaaaagcatca
tttctgttcatagacaagattcttaaatgcacacatgttggaaaatggacggcatttctc
gaagccctaaaaagagcagattatccctatttagtttctctcttgaaattctatgatcaa
gatcaagatcaatgttatcaccaaaagaagatcttacaaatctttgccccatacctcgaa
ctgcagttagaaccatgcgacctcattatgcatttaaatgcatcccatttgatcaatatg
agagatatggaagaaataatggcctgtcagaggaaccaaggttcagtcgctgctacgata
ctccttctagaccgtatacagcgtcggcaggcaccatccagatggtatacagatttttta
aaaattctgtatcagaaaggattcaaggatattgttcgcgagatggagcctgaatttact
cttgactgtgaaatattgaaattaccaaacgtcatcgtgactgaaactaagtcggattcc
gccattgagatggacgagattggcaacactgtagaagaaaagatagaaaccaaagttaag
tattttcagactgaaattacagaactggtcagggtggagaaaattgcaccggccctttgt
cagttaattggtatcgaaaaggtttgccagttaatgcatgttagtcgtaattcccagaaa
gagtccatcggaagcatgttggaagaaatcggcaaattaaagaacaagacgaaatggaga
aactttattacatgtttgaaagattctgattatccccatttagcagatcttctatctagg
ccgcgtacaagtaaactccagtgtagagaaagagatttgcttcgactgtttcattcaaca
ttaggagagcaactagaccctgttgatttaataacacatttagagaaagataatgcaata
aatcatcgggataaagaagaaatacttagtactgtacaacaatcagggaaaacagcagct
tccttagtgctaattgattgcttacaatgccgtctggcccctacacaatggttccgtgct
ttcttaaatgctcttgttgcatgtgacagggaagatattgtgcaaacgatacatccagat
taccttaagagtcacatgagtcaaactgatgatactttgaaagaagaatgtggcaatgaa
gacaattcttctgcagataatgaattggtaaatagaatagacacagcccattgccatatc
tacaagttagaaaagactgcaaagctagagctggacaaaatacaacaacacttcgatgat
atgaaaaatagtctttgtgcacagatagaaaacaaaacaattgcaatgtcaaagacatta
gagcatgttaatactttggcagaaagagaatctcaagaagatatcagtcaggaaatggaa
aagtgtcttcaacaagtgacaacttcatgctatacactttgtgccgcggaacctttcatg
aatttggaaaaattgggtgttttgcacgaacctaaacaaactttacacaggcaaagttct
cttgcaatatcaacaaaaggttcagattctttgaaaaattgtccgaaaccaagtcacgga
aaacacagagtcgttgatgcgcgcagcagacactactcaggttcatctagttcaagttcg
tcatcagggtacttgattgtagagaagtccacctctctttccaccagttcaattacaagt
attgatgagagatcacagacaaaaaatgcatcgaaagtaacgtttgcagacagtaaagaa
tctgcacaagagattcgtgacaaaaaagcgacaaaagtagacaatagtcggttaccgtca
cggttaattcaaaataaggactacctagcgctttattctaaacgaaagatatctcccggc
agaagacgcactgtgtctgaatctagcatcttgtctacagacgcatctatagtttcatca
actgataggccatcttcaagtgctactgatgctttatatgatacatcaattacatcctcg
acaacgaagacaactagtgtttctgaaaagaaagttctagttgaacgtactgagtcctat
ttgtaccaccataaaatggttattagttgtaacaacaattgtctgttttccagtctctgc
gttcttccaagcaataaaactgttcttgttgaccaaggtaacggttgtttctacatatat
gatgacgcaagtaacaagtttataagccgcagattaaatcatcacattcccatttgtgtt
tgcaatgttggcgatagtttgttattcattctgttccgaaggcgtgattgcacgaacgtt
ttggtgcagtattttattcatttttccactaatcccagcccaagaagatttgttactgga
atatcctttgtaaaagaggtacaggtttccagcaaatgccacggacagctgtgttccgtt
gctagtaacaatgacggtgtgttagcattttgctcgaataagcatatacattacatttca
acggatggcaatgagactaaaactgttaattgcgatgttgtcgaaaatgaatggtggcca
atctattcaatacgcgattctggttgtgagttcgcttttatgtatgaagtatactcgtgc
tctgtgtactgcttttgcatatttacgggtcagatgacttggaaagttaaactacctcac
gtggaaggaatgacgctgtgtggagaaggtatatatttatcaatgaatattgataataag
attgaaattctatcaaaatctacaggcaatcatgaaagaatcattacagaacatgtacga
cgcccatttgcggtgtcaagcagccctggccaggatacaattattgttacgcaataccac
ccgaaaggtaacaaaataaatagaatgatcaaatacttttaa
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