Mercenaria mercenaria (northern quahog): 123527494
Help
Entry
123527494 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123527494 isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmer04054
]
123527494
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123527494
Pattern recognition receptors [BR:
mmer04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123527494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
CARD
Motif
Other DBs
NCBI-GeneID:
123527494
NCBI-ProteinID:
XP_045162914
EnsemblRapid:
LOC123527494
LinkDB
All DBs
Position
14:complement(51483182..51496521)
Genome browser
AA seq
935 aa
AA seq
DB search
MATVANFEEVQERILELRSHICRVISAPQVLIWMYGFISRADVLEIRNLHSRAPEKASFL
LIDKIVKCTEPGKWTAFTEALENAEYCYIASLITSSGKDHEQCHHQKRILQIFAPYLELQ
IEPCEIISQMGASGLINVEDIDEIMACQRNQGAVGATMLLLDRMQRRQAPSKWYMDFLKI
LYQKGYKDIVKEMEPDFTLDCEVLKTPNIHITDNTASDISTDEHDCVLEEKIQSKVMNLK
SEIILILNMKKLAARLCQLLDFEKVCNLIEISSRSQKESIEKMLEEISRLSSRTKWRQFI
NCLRESDYTHLADILSRPMTGTMQCKESKLVRLFVPTLGQQLDPAELISYLEQESVINHH
DKEKVICTLRQSGSVAASVVLLDCMQCRVAPHIWFRAFVAALVNCGREDLAQTIDPDFNK
MDSVSGHSKRTDGESSSYETYYLSTELDDAHSHIYNLEKAAMDELGIIQEHFDAMKSKLK
EQIENKTSLLVKTLQDVDKDLRDLRCNAAFFGRNEDNNRLEIEEKLRDVISTNYILRPIK
TFMDLKVLGVFQHQRHSFHRQDSFDTPGIVASRYSKNKKHKLFVLRKIEQSVGSSSSSQS
SGYLFVERSTSLSSTGSTCDSNVRVNKQNTKFSETEESRTINVNPNKRFKQSVFHAVPEH
GELKPLIGTDENDPNSCMISPAVFSTSTSDLPESSSGIGSTNITYTETNKSLRVEREINI
DGTVRNLSVCLNRGMSGNISEAKSWPDLRSPCNTMSKSKIFVKSNENQEEGCDHLLPHSC
LREVKIHKSTFYNNGHSASDSFTDVSDLLPLPSSGTTDTTTSETAGRTSLDEEINLINYS
SVNSVNEDQESISSGSDGTSVSTETYTDNTVSSFLDSRVPDTVEGVSHDLDCSSRTTVQI
ATAKRNLFERFLCYICIRGKKKKSSEKVFSSSVCF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagttgctaactttgaagaagttcaggagagaattctggaattgcgatcacat
atatgtcgtgtcataagtgcgccgcaggtcctgatatggatgtatggttttatctctcgg
gcggatgttttagaaattagaaatctccattcaagagctccagaaaaagcgtcatttctt
cttattgacaagattgttaaatgcacagagcctgggaaatggacagctttcacagaagcc
ttagagaatgcagagtattgttacatagcctccttgataacatcttcgggaaaagaccac
gaacaatgtcaccatcaaaagagaatacttcaaatatttgcgccttatttagaactacaa
atagaaccgtgtgaaattatcagtcagatgggtgcttcaggtcttatcaatgtcgaagat
atagatgaaataatggcatgtcaaagaaatcaaggagctgtcggtgccacaatgctctta
ctggatcgaatgcaacgtcgccaagctccctcgaaatggtacatggatttcctaaaaatt
ttgtatcagaaaggatacaaagacattgtcaaggaaatggaacccgattttactcttgat
tgtgaagtacttaaaacaccaaacattcatatcacagacaacactgcttctgatatctcc
acagacgagcatgattgtgttttagaagaaaagattcagtctaaagtcatgaatctgaaa
tccgaaataatattaattctaaacatgaaaaaattggcagccagactttgtcagctgtta
gattttgaaaaagtatgtaatcttattgagataagtagcagatctcagaaagagtccatt
gaaaagatgcttgaggagatatcccgtctgagtagcagaacgaaatggagacagtttata
aattgcctgagggaatcagactacacgcacttggcagacattttatcccggcccatgact
ggcacgatgcaatgcaaagagagtaaattggttaggttatttgtgccaacgttaggacaa
caactcgatcctgctgaactcatatcatatttagaacaagaaagtgtgataaatcatcat
gataaggagaaagttatttgtacacttcgtcagtctggaagtgttgcagcatcagtggta
cttctagactgcatgcagtgcagggtcgctccgcatatatggttcagagcatttgttgct
gcacttgttaattgtggaagagaagatcttgctcaaacgattgatcccgatttcaacaaa
atggatagtgtttcaggacactctaagagaactgatggtgagagcagttcgtacgaaact
tactatttgtcaacagaacttgacgatgcacatagccatatctacaatttagaaaaagca
gctatggacgaacttggtattattcaagagcattttgacgccatgaaaagcaaactgaag
gaacagatagagaacaaaacttctctcttggtgaaaacattacaagatgtcgacaaagat
ctgcgagatttgcgctgtaatgctgcgtttttcggcagaaatgaagacaacaaccgtcta
gaaattgaagaaaaacttagagatgtaatttctacaaattacattctgcgccctataaaa
acgttcatggacttgaaagtcttgggtgtctttcaacaccagagacattcttttcataga
caagattcttttgacacaccgggaattgttgcaagtagatatagcaagaataagaagcac
aagttatttgttttacgtaagatagagcaatctgtgggctcgtcaagttcgagccagtca
tctggatacttgtttgttgagaggtctacatcattatctagcacgggctcaacgtgtgac
tcaaatgtaagagtaaataagcaaaataccaaattttccgaaacggaagaaagccgcact
ataaatgttaaccctaataagaggtttaagcaatctgtttttcatgcagtgcctgaacac
ggagagctgaagcctttgattggtactgatgagaacgatcctaattcctgtatgatctca
ccagcagttttctccacttcaacgtcggatttgccagagtcttcatctggcattggatct
acaaatataacatatactgagaccaataaaagcttaagagtggaacgtgaaataaatatt
gacggaacagtacgaaatctgtcggtgtgcctgaacaggggtatgagtggcaatatttct
gaagccaaatcttggccagatttacggtctccatgcaacacaatgtctaaatcgaaaata
tttgttaaatctaatgaaaaccaagaagagggatgtgaccatttactacctcattcatgt
ctgcgagaagtgaaaattcacaaatcgactttctataataatggccacagtgcttctgat
tctttcacagacgtatctgatttattaccactaccttcctcagggactactgatacaaca
acttctgaaacagcaggtagaaccagtttggacgaagaaataaatttaatcaattattct
tcggtaaattcagtaaacgaggatcaggaatcgatcagctcagggagtgatggcacgtca
gtatcaaccgaaacatataccgataatacagtcagttcgttcttagactctcgcgtgcct
gatacggttgaaggtgtcagtcatgatttagactgttcctcacgcaccactgttcagatt
gcaacagcaaagagaaatctttttgagcgttttctatgttatatatgtataagaggtaaa
aagaaaaaatcttcggagaaggtttttagctcatctgtatgcttttaa
DBGET
integrated database retrieval system
