KEGG   Mercenaria mercenaria (northern quahog): 123528921
Entry
123528921         CDS       T07835                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
mmer  Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mmer03037]
    123528921
Cilium and associated proteins [BR:mmer03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   123528921
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Beta-prop_EML_2 WD40_WDHD1_1st Zn_ribbon_IFT122 WD40 WD40_CDC20-Fz WD40_Prp19 Zn_ribbon_IFT122_C ANAPC4_WD40 EIF3I TPR_IF140-IFT172 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 TPR_GEMI5 Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT140_2nd Beta-prop_WDR75_1st Beta-prop_NWD2_C Beta-prop_SPT8 RING_XB3-XBAT31 zf-C3HC4_3 TPR_2
Other DBs
NCBI-GeneID: 123528921
NCBI-ProteinID: XP_053377470
LinkDB
Position
13:complement(33805508..33846171)
AA seq 1249 aa
MRAVPTWVDKVHDRDKQEQCIWALCFKPDGSQLIVAAGNRVLVYDTNDGTLIQPLKGHKE
AVHCVCYAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDAIQCMAYNPVTHALASCAVT
DFGYCTNYDAMYDQAYNTSLVKDFVRGLWSPEQKSVSKHKVSSRVTACSWTNDGQYLALG
LYNGLVSIRNKNGEEKVKIERPGATSSPIWSLQWNPSRDEAYDVLAVADWGQRLSFYQLS
GKQMGKDRQLGYDPCFVRWFSRGEYVVVGGSNKQCNLHTKEGVKLGTIGDQQSWMWAAAV
RPDSNYVAVGCQDGTIAYYQLIFSTVHGLYKDRYAYRDNMTDVIIQHLITDQKVSVNPIP
GDDEEVNVAAAKAIREELKAPLEKFSHKKLRIKCRDLVKKIAIYRHRLAVQLPDKIVVYE
LYSDDAADMHYRVKDKLNRKFECNLLVVCSQNIILCQDKRLQCYSFQGVKEKEWVMESLI
RYIKVIGGPTGREGLLVGLKNGQILKLFVDNPFPIVLLKQSTSVRCLDMSASRTRLAVVD
EHNTCLVYDINTKELLFQEPNANSVAWNTHYEDMLCFSGNGLLNIKASNFPVHQQKLQGF
VVGFSGSKIFCLHIYSMSSVDVPQSAPMYQYLEKKLFKDAYKVACLGVTDGDWETLAHEA
LEGLDFDTAKKAFIRIRDLRYLELIHNIEERKKRGENDNMVFLGDVYGYQGKFNEAAKLF
KKSGQEHKAMNMYTDLRMFDYAKEFIGSGDPMDKKMLITKQADWAKSSNEPKAAAEMYIS
AGEYVKAIEIIGDHGWSEMLIDLARKLDKADRESLSRCAHHLGKLEQYGYAAEVYSKMGD
HKSLIMLHVEAKHWEDAFTLVEKHPEYKEDVYVPYAQWLAENDRFEEAQQAFHKAGLQAE
AVKVLEQLTYNAVIESRFNDAGYYFWKLSIQCLDIARDEPDKMEEMLPKFYDFQRKADMY
YAYHSIQRYTDEPFTSHLPEALFNISRYLLHQMHDDIPHGISKAGTLYALAKQSKNLGAY
KLARYAYEKLQNTRVPPRFQEAVDLGSIIIRSKPFLDGEELLPMCYRCSTTNPLLNNGGS
QCINCKQPFVHSFVSFEVLPLVEFVLEDGITDEEAIQILDLSIPKQKKEEKNWQESRMGN
MQSLRLGDEPEEEIEEEDPFSTKLMTFDQESTEFRPVIVNRNVLKIMSRADVYIRKWPKP
LRHQYFRSLLPDVTITMCPSCQKLFHTDDYELQYLQHGHCPFCRHKIET
NT seq 3750 nt   +upstreamnt  +downstreamnt
atgagagcagttccaacttgggtggacaaagtccacgacagagacaagcaagagcaatgt
atttgggccttatgtttcaaaccagatgggagtcagttgatagtagcagcaggaaacagg
gtgcttgtatatgacactaatgatggtacacttatacagccactgaagggacacaaagaa
gcagtacactgtgtttgttatgctaaagatggcaagagatttgcttctggatcagccgac
aaaagtgtgattatctggacaagtaaacttgaaggcatcctcaaatacacgcataatgat
gctatacagtgtatggcctacaatcctgtcacacatgctctcgcaagctgtgcagtcacc
gactttggatattgtacaaactatgatgccatgtatgatcaggcatataacacaagtctt
gtaaaagattttgtcagaggtctttggtcacctgaacagaaatctgtttcgaaacacaag
gtgagcagtagggtgacagcatgcagctggacaaatgatggacaatatcttgctctagga
ttgtacaatggacttgtcagcattagaaataagaatggtgaagagaaagtaaagatagag
cgaccaggggccacttcgtccccgatatggtcgctacagtggaacccctcgagagatgaa
gcgtatgatgttctagcagtcgctgactggggtcaaaggttatccttctaccagttgtca
gggaaacagatgggaaaggacagacagctgggatatgatccatgttttgtacgctggttc
tcacgaggagagtatgtggttgtgggaggctctaacaaacaatgtaatctacacaccaag
gaaggagtgaagctaggaaccattggagatcagcagtcatggatgtgggctgctgctgtc
agaccagactctaattatgtggctgtgggttgtcaggatggaactattgcctactatcag
ctgatcttcagtacagtacatggtctctacaaggacaggtacgcatacagagacaacatg
acagatgtgatcatacaacaccttatcacagatcagaaagtttcagtgaatcctatacca
ggagatgacgaggaagttaatgttgcagctgctaaggctataagggaagagcttaaagct
cctctcgaaaaattcagccacaagaaattgagaataaagtgtagggatttagtaaagaaa
atagctatttacagacacagactagctgttcagttacctgacaagattgttgtgtacgag
ttatactcggatgatgctgcagacatgcactacagggtgaaagacaaactcaacagaaaa
tttgagtgtaatttacttgtcgtctgctcacagaacatcatattgtgtcaggacaagcga
ttacagtgttacagtttccagggtgtgaaggagaaggaatgggtgatggagtcattaatc
agatatatcaaggttatagggggccctacaggcagggagggccttcttgttgggctgaaa
aatgggcaaattctgaagttgtttgtggataacccattccctatagtgttgttaaaacag
agcacctcagtcagatgtctagacatgagtgctagtagaacacgtctagcagttgtagat
gaacataatacatgcctcgtgtatgatatcaacacaaaggagcttctcttccaagaaccc
aatgcaaacagtgtagcatggaacactcactatgaagatatgttgtgtttctctggtaac
ggtctactgaacataaaagccagcaatttccctgtccatcaacagaaactacagggtttt
gtggtagggtttagtggatctaagatattttgtctgcacatctactccatgtcatctgtg
gacgttccccaatcagcaccaatgtatcagtacctggagaaaaaactcttcaaggatgcc
tataaagttgcctgccttggagtaactgatggggactgggaaactctcgcccatgaagcc
ctggaaggcctagactttgatactgccaagaaggcattcatcaggattcgggaccttaga
tacctggagcttatacataatatagaggagcgtaagaaacgtggagagaatgacaacatg
gtattcctgggcgatgtttatggttaccaaggaaaattcaatgaggctgctaaactgttc
aagaaatcaggacaggaacataaggcaatgaacatgtatacagatctcaggatgtttgac
tatgctaaggagtttattggttctggagatcctatggacaagaagatgttgattacaaaa
caagcagactgggctaagagcagtaatgaaccaaaggctgcagccgagatgtacattagt
gccggagaatatgtgaaagctatagagatcattggggatcatggatggtcagaaatgttg
atagatttagcaagaaagttggacaaggctgaccgcgagtcattgtcaagatgtgcacat
cacctgggtaaactggagcaatatggttatgctgctgaggtgtacagtaagatgggagat
cataaatcactcatcatgttacatgtagaagctaaacactgggaagatgcattcaccctg
gtagagaaacacccagaatacaaagaagatgtttatgtaccatatgctcaatggttagca
gaaaatgatagatttgaagaggctcagcaggcattccacaaagctggccttcaagctgag
gcagtgaaggttttagaacagttgacctacaatgctgtcatagaaagcaggtttaatgat
gcaggatattacttctggaaactgtctatacagtgtctagatatagctagagatgaacca
gacaagatggaggaaatgttacccaagttctacgatttccagagaaaagctgacatgtat
tatgcttatcattccatccagagatacactgatgaaccatttacgtcacatctgccagag
gcattgttcaacatttcacgttatttgttacatcagatgcatgatgacattccacatggt
atatctaaagctggtacactgtatgcattagcaaagcagagcaagaatcttggagcatac
aaactggccaggtatgcctatgagaagctacagaatactagagtaccaccaaggttccag
gaagctgtggatctcggcagtattatcatcagatctaaacctttcttagacggagaggag
ttgttacccatgtgttacagatgttccaccacaaaccctttactgaacaatggaggtagt
caatgtatcaactgtaaacagccatttgtacattccttcgtctcatttgaggtgttaccg
ctggtagagtttgttctagaagatggcatcactgatgaagaagctatacagatattagat
ttatctatacctaaacagaagaaagaggagaaaaactggcaggaatctagaatgggcaat
atgcagtcattgagactaggagatgaaccagaggaggagatagaagaggaagatcctttc
tctacaaaactgatgacctttgatcaagagagcacagagttcagacctgtgattgtcaac
cgtaacgtgttgaagataatgtctcgtgcagacgtgtacattagaaaatggccgaaaccc
ctccgacaccagtacttcagatcattgttacctgatgtgacaattacaatgtgtccaagc
tgtcagaagttgttccacacagatgactacgaattgcagtacttgcaacatggccactgc
ccattctgccgacacaagattgagacctag

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