Mercenaria mercenaria (northern quahog): 123528979
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Entry
123528979 CDS
T07835
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
123528979
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mmer01007
]
123528979
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmer03016
]
123528979
Enzymes [BR:
mmer01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
123528979
Amino acid related enzymes [BR:
mmer01007
]
Aminoacyl-tRNA synthetase
Class I (U)
123528979
Transfer RNA biogenesis [BR:
mmer03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
123528979
Prokaryotic type
Other AARSs
123528979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
123528979
NCBI-ProteinID:
XP_053378371
LinkDB
All DBs
Position
13:complement(77690763..77744444)
Genome browser
AA seq
1291 aa
AA seq
DB search
MAQPVPEKISFPDEEENVLKYWKEIDAFKTSMKLSKGRPRYTFYDGPPFATGLPHYGHIL
AGTIKDVVTRWAHQSGFHVERRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEAYNAEC
RKIVMRYSSDWEHIVTRLGRWIDFEKDYKTMYPWFMETIWWVFKELYNKGLVYKGFKVMP
FSTACNTPLSNFESGQNYKDVVDPAVIISFPLEETPDISMIAWTTTPWTLPSNLSLCVNP
TLDYVKVKDNNTGKVYIMMEARLEALFKHPEEYTVLEKFPGKVLENKKYKPLFQYFTYMR
ERSGAFRILCDSYVTAESGTGVVHQAPYFGEDDQRVCLKYGIITKDSEMICPVDASGRFT
AEVTDFQGLYIKDADKKITKKLKDEGRLVHQSETKHSYPFCWRSETPLIYKAVPSWFVRV
EHAKEQLLNNNSQTYWVPDFVKEKRFGNWLREARDWAISRNRYWGTPIPLWVSDDMEEVV
CVGSIEELKQLTGVKDINDLHREVIDKLTIPSKLGKGKLKRVSEVFDCWFESGSMPYAQV
HYPFEHKKAFDDSFPADFIAEGIDQTRGWFYTLLVLSTLLFGKPPFKNLVCNGLVLASDG
QKMSKRKKNYPDPLEVVHKYGADALRLYLCNSPAVRADFLRFKEEGVRDILKDVFLPWYN
AYRFLMQNVERLEREEGVSLEYHEEKLGSSGNYMDRWILSFTQSLIKYVRQEMQAYRLYT
VMPRLVKFVDELTNWYVKMNRKRLKGDGGPDDCLDALTTLFSVLFSMSKVMAPLIPYITE
LMYQNLKHLLDPAAMKGQDTRSVHFMMIPEPREDLIDTHIESAVASMQSVIELGRLVRER
NTLPIRYPLKEVVAIAGDGDVLRDIQSLQSYILEELNVKKLTTTTDKEKYGARLHAEPDH
RVLGAKLKQQFKSVTKAIQELTDKQLMDFEKTGEIEVLGNKLVEGDLRLMYKFDGAKGSP
TYDAHAYPHVLVLVEVTPDQSMLDEGLARDVVNRIQKLRKEAGLMPTDDITVYYDTTPEL
GKIITNFSDFIFSTIKQPLVPYPVPPGQKVLVVSDPTKKDYKVKNNKLEMAIVKRGADGA
ASSSTAPVVATLSPAPVKNGVKPACKFVNVQLCGMSCHEGRGGSNQATVLLENPQGQFVL
SADSLRKQAQSVFGVRGRKVKVYSDANLQTVLPSSGNTSSLNRKTLYVVPCTGEVCDKTT
ACNITSPVCHFANVEYKGAGGKSCKGTLLLENPRGDTCTMAQLQSQVQVLAGQNGRQVKL
YRKPGQKDEVTTQNVKNLLELHSETLYAVCQ
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggcacagccagtgccggagaaaatctcctttccagatgaggaagagaatgtactgaaa
tactggaaagaaattgatgccttcaaaacttcaatgaaactttctaagggaaggccaagg
tacactttctatgatggccctccatttgcaacagggttaccccactatggccatatctta
gcaggaactatcaaagatgttgtgacaagatgggcacaccagagtgggtttcatgtggag
cgaaggtttggttgggattgtcatggtctgcctgttgaatatgagattgacaagactctt
ggtattaaaggaccagaagatgtggctaaaatgggaatagaagcttataatgcggagtgt
cgcaaaattgtcatgagatactcttctgactgggagcacattgtgactcgactcggcaga
tggattgattttgagaaggactataagacaatgtacccctggttcatggagacaatctgg
tgggtgttcaaggaactctacaacaaggggctggtgtataaaggttttaaagttatgcca
ttttctactgcatgtaatacacccctgtcaaactttgagtctggccagaattacaaggat
gttgtagatcctgctgttatcatcagttttcccttggaggagaccccagacatctctatg
attgcttggacaactacaccctggacgttacctagcaacttatcactgtgtgtcaatcca
accttggactatgtcaaggtcaaagacaataacactggaaaagtttacatcatgatggaa
gctaggttagaagctctgttcaaacatccagaggaatacaccgtcctagaaaagtttcca
ggaaaagtgcttgagaataagaagtacaaaccacttttccagtactttacttatatgcga
gagaggtctggagcatttcgtattctttgcgacagctatgtaacggcagaaagtggtaca
ggagttgtacaccaggccccttattttggagaggatgatcagcgggtatgtttgaagtat
ggaatcattaccaaagacagtgagatgatctgtcctgtagacgctagtggcaggtttaca
gcggaagttacagattttcaaggactttatatcaaggatgcagacaagaagatcacaaag
aagctgaaagatgaaggacggcttgtacaccagagtgagaccaaacatagttacccattc
tgttggcggtcagagacgccactcatctacaaggctgtaccaagctggtttgtccgggtt
gaacatgctaaagaacagctgttaaacaataactcacagacatactgggtgccagacttc
gtgaaggaaaagcggtttggtaactggttacgagaagccagagactgggctatatcccgt
aaccggtactggggaacaccaattccattgtgggtctcagacgacatggaagaagttgtg
tgtgtgggatcgatagaggagctcaaacaactgaccggtgtcaaagatattaatgacctg
catagagaagtgattgataagttaactattccatcaaaactgggtaaaggaaagttgaaa
cgtgtatcggaggtgtttgactgttggtttgagagtggcagtatgccctacgctcaggtt
cactacccatttgaacacaagaaagcctttgatgattcgttcccagcagacttcatcgct
gaaggcattgaccagactaggggatggttttacacattgcttgtgttgtcgaccttgctg
tttggaaaaccacctttcaagaacttggtgtgcaatggacttgtcctagcctcagatgga
cagaagatgagcaaaagaaagaagaattatcctgaccctctggaggttgttcacaaatat
ggagctgatgcactcaggttgtatctgtgtaactccccggctgtgagagctgatttcctc
cgcttcaaggaagagggtgtgagagatattctcaaagatgttttcctaccctggtataat
gcctacagatttctcatgcagaatgttgaaagattggaaagggaagagggtgtgtcccta
gaataccatgaggagaagttgggcagctcaggcaattacatggacagatggattctatca
ttcacacaatctctcatcaaatatgtcaggcaagaaatgcaagcatacagactttacacg
gtaatgccaaggctggtaaagtttgtggacgagttgaccaactggtatgtaaagatgaac
cgtaagcgactgaagggagacggtgggcctgatgattgtctagatgccctcaccacgttg
ttttctgtactcttttcaatgtccaaagtcatggccccactgataccgtatatcacagaa
ttgatgtaccaaaacttgaagcatctgctggaccctgcagcaatgaagggtcaggacact
cgcagcgtgcacttcatgatgatccccgaacctagggaggatttgattgatacacatatt
gagtcagctgttgccagtatgcagtcagtcattgaactgggtcgtcttgtcagggaaagg
aacactttaccgatcaggtatcccttgaaggaagtagttgctattgctggagatggtgat
gtgctgagagatattcagtcactgcagtcttatatacttgaggagctgaatgttaagaaa
ctcacaactacaacagacaaagagaagtatggtgcccggctgcatgcagaacctgatcat
agagtgttgggagccaaactgaaacaacagtttaaatcagtaactaaggccatccaggaa
ctgacagacaaacagctgatggattttgagaagactggagagatcgaggtccttggaaac
aagctggtggaaggagatctaagactgatgtacaagtttgatggagctaagggatcacca
acatacgatgcacatgcatatcctcatgtattagtgctagtagaagtgacaccagaccag
tcaatgttggatgaaggtttggcaagagatgttgtcaaccgtatccaaaaattgaggaag
gaggctggcttgatgccgacagatgacattacagtgtactatgataccaccccagagctc
ggcaaaattatcactaacttctcagattttattttctcaaccatcaaacaacctctggta
ccttacccagtaccacccggacagaaagttctggttgtatcagaccccacgaagaaggac
tacaaggtgaaaaacaacaaattagagatggctattgttaaaaggggtgctgatggtgcg
gcctcatcatctacagctccagttgtggcgacactgtcaccagctcctgtgaaaaatggt
gtgaaacctgcgtgtaaatttgtaaatgtccagttatgtggtatgagctgccatgagggc
cgtggaggctccaaccaggccacagtactgctggagaatccacagggtcagtttgttttg
tcagctgactcactgagaaaacaggcacagtctgtgtttggtgtcaggggacggaaagta
aaagtttattcggatgcaaatcttcaaacagtcctgccatcatctggaaacactagcagt
ttaaacagaaaaacattgtatgtggtcccctgtactggtgaggtttgtgataaaaccact
gcctgcaatataacgtctccagtctgccattttgccaatgtggagtataaaggtgctggt
gggaagagctgcaaagggacactactcttggagaatccccgaggagacacttgtacaatg
gcacaactgcagtctcaggtgcaggttttggcaggacaaaatggccgacaggtgaaattg
tacagaaaacctggtcagaaagacgaagttactacacagaatgttaaaaacctgcttgaa
ttacattctgaaaccctttatgcggtgtgtcaatga
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