Mercenaria mercenaria (northern quahog): 123532311
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Entry
123532311 CDS
T07835
Name
(RefSeq) thyrotropin receptor-like isoform X4
KO
K04249
thyrotropin receptor
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04080
Neuroactive ligand-receptor interaction
mmer04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
123532311
04081 Hormone signaling
123532311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mmer04030
]
123532311
G protein-coupled receptors [BR:
mmer04030
]
Rhodopsin family
Peptide
Thyrotropin
123532311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
7TM_GPCR_Srsx
Ead_Ea22
Motif
Other DBs
NCBI-GeneID:
123532311
NCBI-ProteinID:
XP_045169657
LinkDB
All DBs
Position
1:81929501..82008535
Genome browser
AA seq
1051 aa
AA seq
DB search
MELAFMLFLLLIFDGVDAETQLLCNMHCTCKMTDSDNLLVTCTGKGIKDVLTDLPTSTTK
LYFSGTNIRTLQKGAFAIYPFLTELFFRDTASEPCKLETIEAGAFDGLPRLETLGMIGCG
HLTSIGSGVLTTFQNLETLHIYRSGLKAVPDLSQFRTLNPDMNGIMIEIDFHNNRIAKIH
TEDFFGVKTDLLKLEENQIKKIEAHAFRNATIVSLSLNMNSDLKDIDENAFDDITHLNKL
DLSHTKISSLPTKGLSELRHLILKVTPSLKHFPSVLEFRKIERAELTYPHHCCAFINPEK
QNPSAWKAKQAQEMINKACALSTSPSPTTPGILKPSSLPSDTKDINKFGDILDRETSRQN
REKRQSFDGFGDIVKLLNDTDTESGTGFSSSDLFGNFKPPSGMNDKNVGSAIHNVMFHKS
TVSINENLTQRADCGEIYIYNRNVACTPEPDAFNPCEDVMGYEWLRVTVWFVLLAALLGN
SVVLIVLTSSRGKFTVPKFLMCNLAFADFIMGVYLILLASIDVRTLGEYFNHAVKWQNEG
GCQAAGFLSVFSSELSVFTLTILTLERWYAISHAIHLNKRLKLRQSVALMILGYTFASVL
ALLPLVGISSYGNVSICLPMRAESGVDIGYIVSLLIMNGIMFLAICFCYISMFLKVKGSA
STRRSNDATIAKRMSLLVFTNFACWAPIAFFGLTASAGVPLIDITNSKILLVFFYPLNSC
ANPFLYAILTKQFRKDVFILLGKFGICVERANMYRGTMTSRTLSNSRGHKDSTSHRIHRR
SESVLTHISGTNQNSKYCVNGIPKVHPSHRESSEAQPFIERKSHIDRAAEFANKEPMLAG
EDVILDSWDNSESNEMQKPPNPRYIRSVSDYVSLNAKKLPDKHHSRTRASIDTFFSSSTD
TTYVSDNSHSQDDVWQIRKDCLEQRNMVKDKDIETSVIDSKNSYPVFPVDEDVSFSQQNC
YTVSADLDESDAYQRAIREETVSKNGDNKVLIKSLSKPVNSTFHELRSRFRRSPSLSSLD
ETNEMRLLANTQIDRTCDYEEKNTEMMSGDV
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgctttcatgttgttcctacttctcatcttcgatggagtagatgcagagaca
cagttactttgtaacatgcattgcacgtgcaaaatgacagattcagacaatttgcttgta
acatgtactggtaaaggcatcaaagatgtactaacagatcttccaacaagtactacaaaa
ctgtacttcagtggtacgaatattcggactttacaaaaaggcgcatttgcaatataccca
ttcctcactgaactattctttcgagacacagcatctgaaccatgtaagctcgaaactatt
gaggcaggggcctttgatggtctaccgaggttagaaacactgggaatgattggatgcgga
catcttacatctattggttccggagtactcacaacttttcaaaatcttgaaacactacat
atatacaggagtgggctaaaagctgttccagatttgtcacaatttagaacactaaaccca
gatatgaacggcattatgattgaaattgatttccacaacaaccggatcgccaaaatacac
acagaggactttttcggtgtcaaaactgatttgttgaaattagaagagaaccaaattaaa
aagatagaagcgcacgcattcagaaacgccacgattgtcagtttgtcactaaacatgaac
agtgatttgaaagatattgatgaaaacgcttttgatgacatcacacatcttaataaactt
gacttgtcacacacaaaaatatcaagtcttcctactaaaggtctcagtgaattgcggcat
ctaatccttaaagtgacgccctcattgaaacattttccatcagtactagaattcagaaaa
attgaacgagcagaactgacgtacccacatcattgctgcgctttcataaatccagaaaaa
caaaatccttcggcctggaaagctaaacaagctcaggaaatgatcaacaaagcatgtgca
ctttctacatccccttcgcccactactccaggtatactaaaaccatcatctcttccatca
gatacgaaagatatcaacaaattcggtgacatattggacagagaaacatctcgacaaaac
cgtgaaaaacgtcaaagtttcgatggattcggagatattgtaaaactgttaaatgataca
gacactgaatcaggcactggcttttcgtcttctgacctttttgggaattttaaaccacct
agcggtatgaatgacaaaaatgtagggtcagcaatacacaatgtaatgtttcataagtcg
acagtgtctataaatgaaaacttgacccaaagagcagactgtggagaaatttacatatat
aacagaaatgttgcatgtactcctgaaccagacgcatttaatccatgcgaggatgttatg
ggatatgaatggctaagagttactgtgtggtttgtgctcctagctgccttattaggaaat
agcgttgtactaatcgtactcacgtcaagccgtggaaaattcaccgttccaaaatttctt
atgtgcaatttagcgtttgctgattttattatgggagtatacttaattcttcttgcttct
atagatgttcgtactttgggcgaatattttaatcacgctgttaaatggcagaatgaggga
ggatgtcaagcggccggttttctttcagtgttttccagtgaattatctgtgtttacatta
acaattttaacacttgagagatggtatgcaattagccatgctattcatcttaacaaacga
ttaaaactcagacagtcagttgcacttatgattcttggctatacatttgcttctgttctt
gcacttttaccgcttgttggaataagcagctacggtaatgtcagtatttgcctcccaatg
agggcagagagtggagtcgatattggatatattgtgtcacttctgatcatgaacggcatt
atgttccttgctatctgtttttgttacatcagtatgtttttaaaagtgaagggcagtgca
agtacccgtagaagcaacgatgccacaatagcaaaacgcatgtcattattagttttcaca
aattttgcttgttgggcaccaattgctttttttggacttacggcatccgctggggtgccg
cttattgatatcactaactcaaaaattttacttgtgttcttttatccgcttaattcttgt
gcaaacccatttctatatgcgatcctaactaagcagtttaggaaggatgttttcatttta
ttagggaagtttggaatttgtgttgaaagggctaatatgtaccgtggtactatgacatca
agaactttatctaactcgcgtgggcacaaagactcaacttcacatcgaatacatagacgt
tctgagtcggttctaacacatataagcggaactaatcaaaattcaaagtactgtgtaaat
ggtataccaaaagttcacccaagtcatcgcgagtcgtcagaggcccaaccatttatagaa
agaaagagccacattgatcgggctgccgaatttgccaataaagaaccgatgctggcggga
gaagatgtcattttagactcatgggataacagtgagtccaatgaaatgcagaaaccacct
aatccgaggtacatccgtagcgtaagcgattatgtttcattaaatgctaagaaactacca
gataaacatcattcaagaacaagagctagtatagacacatttttcagtagcagtactgat
acaacatatgtcagtgacaactcacattctcaagacgacgtttggcagatacggaaggac
tgccttgaacagagaaatatggtgaaagataaagatattgaaacatcggtgatagattca
aaaaattcgtatcctgtttttcccgtggacgaagatgtaagtttctctcaacaaaattgt
tacacagtgtcagctgatttagatgaaagcgatgcatatcaacgcgctatacgggaagaa
acagtctctaaaaacggagacaacaaagttttaataaaatcattaagtaaacctgtaaat
agtacctttcatgaacttagatctagatttcgtcgaagcccttcgctgagcagcctagat
gagacgaatgaaatgcgtttgctggcaaatacgcagatagacagaacttgcgattacgag
gaaaagaacactgaaatgatgtctggcgatgtataa
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