KEGG   Mercenaria mercenaria (northern quahog): 123534922
Entry
123534922         CDS       T07835                                 
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
mmer  Mercenaria mercenaria (northern quahog)
Pathway
mmer03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:mmer00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    123534922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmer03000]
    123534922
   04121 Ubiquitin system [BR:mmer04121]
    123534922
   03036 Chromosome and associated proteins [BR:mmer03036]
    123534922
Enzymes [BR:mmer01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     123534922
Transcription factors [BR:mmer03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    123534922
Ubiquitin system [BR:mmer04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     123534922
Chromosome and associated proteins [BR:mmer03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    123534922
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     123534922
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JmjC LRR_4 Cupin_8 F-box JHD LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 123534922
NCBI-ProteinID: XP_045173336
LinkDB
Position
12:complement(56675490..56762555)
AA seq 2166 aa
MEHLETMYYKKDSQKSNLKKKQTKRKKLVGSRPENFEIVIENAETSEVKYFNFDKHETVR
NRNLNERKKNVYFGDDVFLGKVFDEGRVNEQDCDTKWYDEESEMNLNVDDFNKNVENPHN
FSNIIHNSRINGVEHCFDNNGNEITNVKTELSELDQEDTVMFGGNMWEYNEKTNDHSKTK
LTDLEKTESALWNIAAGYDFDAPIDGKLKFEPVSPPHVQDDSSISFDISNIKIKEESVRS
IKEEEDIYDRRIFVNINCEPLHSDDLVHAVDNAAEKFKPCSFGIVNDHSLKDIYTFENND
VNSSVSQLPSSCKKLLSWGQNVEETAFEKSDRNNFKAQSAEHLTEKRNMPCSVDTSSGLR
HDILFPNLASAIRKNTDKSQMDKKPTHTSYNVQMLTPEHDVVNRSDRTDKEEDAAETKTS
DGKDTFKSKEHCVWRKINECPVFTDDERKAVTKVKFTLKKKHSVYSKYNALSNIDPNSEG
DKCSSEKFFTREGKDDNDKQELSIASVHQLSAPHTGANKETRIEENNTKSDFTQKDKRRS
WQLCYEKFALERSREMSDDLSIGNLVNEHGRNLVNSKLDNADHNDLDYNYVMLDGIMSLS
LNGSGELDRNAANSQENDAFTNNISISKGLKSHSQADKIEASMKAGSLHTYTGNIENLHT
RIDDNLEIGWEIKTEVARKVSDDTDDDIVKHNNYDIKKERTEVKKENFNSDTQGCFLDKS
NKVVNVDESFISGFKDNVCLKEETLACIKTEDTKTAAKPAKRAEELFEDNKKVSNFKNIF
SIISDYESKTVNKINLANGPKECTVQENAGDNKESTLKLHISLPKLWKNDTYQNKENSED
EPTGSYETDSDDDNITSSNNENDSEYEENNEQDICESYRIVQRYYIDRCTGKTLQKLLLR
VKERKTYTDHELDDDEIEGKRSYKIEDKLTSDKYNKDYVKKLHGEEFNLRYLQENGLQYP
ILFAEKNGLGLRVPSDNFKVCDVKACVGSRRMLDVMDVNTQKGLEMTMKEWVKYYENTER
DRLLNVISLEFSHTKLENYVESPNLVREVDWVDTAWPQHLKDCQTESTNAIDKMKYPKVQ
KYCLMSVAGCYTDFHIDFGGTSVWYHILHGEKIFWLIPPTDKNLAKYENWVLSGKQGDAF
LADSIEECQMIQLVAGNTFIIPSGWIHAVFTPKDSLVFGGNFLHSFNMVNQLKVSSIEDK
THVPMKFRYPFYAEINWYVLERYVHSLTGVTYLEKPQLNEDLEVINTKVERDQANFELLE
EKLNKRLSVSLTRIDDTSPGRKSTSDDDSTASGPTRSPGQASSLPRTGRKSSSESANSLD
LKSVDKPEIMKVPYKSPVKKKTKYVHLTKYELEGLIEVLAWVESLPPSKKGIPKDLIDPD
TVLREVRHLIQEHMKDNPELAITGEPVLEWTKATKKLIKLKQKAKTAKLLGTHCVPKVKA
AGGKNAAGNRHRRVRCKKCEPCTRDDCMECNFCKDMRKYGGPGRAKQSCISRQCLAPILP
KGIVCLICKMPQCLLDKPVKTDGAVDDDAEDYSSSLMECGICWEIVHPLCLRKKNENLNN
DGVLNEDLPNSWKCSKCCFDGKEGKLMARVFKGGWRPTPASTPPPLSVSPPLQPQSPVGS
PGVFVSEGKRVTLNQGIDSKKTMPKLSPSPEHREIDIKPLNGSTSSHTEDTLPSSLAPVP
LKAEMLDDEKTHVKMEVTNTLPLKNEPAEENFKTYSKRSSSPLEENPMKKKRNISPSPSR
ASKSSRVSGMPKLSPGSGRKSAKTATPDLSSKRSKRETTPRSGTRCTYDFDDDEEFMDIS
APLPDKGKGKGVKGRKNLHLKTKDFGANLASNVKNKSHTQTVEPKPEDRGHLTKKSSEKL
CSEQLRQTLISHIEKRNLPIIKPQFVVRPAPISPPDDYCVMNNGQKHPLSRKLWTYIFSF
LPCADLARCQAVCQIWNRWCINPDLWKKIDLSKKRIVQTHLMGIVRRQPEYLDLSAVIMT
QKQILWLLERIPLLKTLIVSKCSWATISGLCMSACPLLYKLDVSWATGLNDRCFEDLISP
PVDRKPAVKNISRLHRLKSVHLSGTEITDVSLELMTLHLAQLEELNISYCTRITDRGIQI
LASSKSPTQDSLKVLNISGCRGLTEVSLDAIKNFSKLKELFAMNCIRIPTERCRSLRHPR
LKTFRF
NT seq 6501 nt   +upstreamnt  +downstreamnt
atggaacacttagaaacaatgtattacaaaaaagactcacaaaagtcaaatttgaaaaag
aaacaaactaagaggaagaaacttgtaggcagtaggcccgaaaacttcgaaattgttatt
gaaaatgcggaaacgtcagaagttaaatatttcaattttgacaaacacgagactgttaga
aatcgtaatttgaatgagagaaagaaaaacgtgtattttggagacgatgtgtttcttggt
aaagtatttgatgaaggtcgcgtaaatgagcaagattgtgacactaaatggtacgacgaa
gaaagtgaaatgaatttaaatgtggatgatttcaacaaaaatgttgaaaacccgcataat
ttcagtaatattattcacaatagtagaattaatggagtagaacattgtttcgataataat
ggaaatgagataacaaacgttaagactgagttaagtgagctcgatcaagaagatacggtc
atgttcggtggcaacatgtgggaatataatgaaaaaacaaatgatcacagcaaaacaaaa
ctgacggatttagaaaagacagaatctgcgctctggaacattgctgcagggtatgatttt
gacgcacccattgatggtaagttgaaatttgaacctgtgtccccgccacatgttcaagat
gatagttcgatatcgtttgatatcagtaacatcaaaattaaagaagagtcggttcgtagt
ataaaagaagaagaagatatatatgacagaagaattttcgtaaatatcaactgtgagcca
cttcacagtgacgaccttgtgcacgctgttgataacgcagcagagaaatttaagccatgc
tcattcgggattgttaatgatcatagtctgaaagatatttatacatttgaaaataatgat
gtaaattccagtgtctcacagttgccttcatcatgcaaaaaattacttagttggggtcaa
aatgtggaagagactgcatttgaaaaatcagatagaaacaactttaaagctcaaagcgca
gaacatttaacagaaaagagaaacatgccatgcagtgttgacacatcatcgggattacgg
catgatattctgtttccaaatttagcatcagcaattcgaaaaaatacggacaaaagtcaa
atggataaaaaacctacacatacatcgtacaatgttcagatgttaacaccggaacatgat
gttgttaataggtcagatcggacagataaagaggaagacgctgctgagacaaaaacttct
gatggcaaagatacttttaaaagtaaagagcattgtgtttggcgaaaaataaacgaatgt
cccgtctttactgacgacgaaagaaaagcggttactaaagttaagtttactcttaaaaag
aaacattcagtatattcaaaatataatgctttaagtaatatcgatccgaattcagaaggt
gataagtgcagttcagaaaagtttttcacacgtgaaggtaaagatgataatgacaaacag
gaattatcaatagcatctgtccaccaattatcagcaccacacacaggtgcaaataaggag
acaagaatcgaggaaaacaacaccaagtcagactttacacaaaaggataaaaggcgatca
tggcagttatgctatgaaaaatttgcactagaaagaagcagagaaatgtcagacgactta
agcatcgggaatttagtaaatgagcatggacggaatttagtaaatagtaagttagataat
gcagaccacaatgaccttgattataattatgttatgctggacggaattatgtcgttgtct
ttaaacggaagtggtgaattagatagaaacgccgcgaattctcaggaaaacgatgcgttt
actaataatataagtatttcaaaaggcttaaagtcacattctcaggctgataaaatcgaa
gcttctatgaaagctggtagtctacacacgtacacgggtaacattgagaatttacacacc
agaatagacgacaacttagaaattggatgggaaataaaaacagaagtagcaagaaaagtt
agcgatgacactgatgatgatatagttaaacacaataattatgatattaagaaagaacgt
actgaagtgaaaaaagaaaactttaattctgatacacaaggatgcttcctcgataaaagc
aacaaagttgttaatgtcgacgaatcatttatttcaggattcaaagataatgtttgttta
aaagaagaaacactggcatgtattaagactgaagatacaaaaacagcggctaaaccggct
aaacgagctgaggaattgtttgaagataataagaaagtatctaactttaagaatatattc
agtattatatcagattatgaatcaaagactgtaaataaaataaatttggcgaatggacca
aaagaatgcactgttcaggaaaatgctggagataataaagagtcaactttaaagttacat
atatctttacccaagttgtggaaaaatgatacatatcaaaataaagaaaactctgaagat
gaaccaactggaagttatgaaacagacagtgacgatgataatatcaccagttcaaataat
gaaaatgattctgaatatgaagaaaataatgaacaagatatttgtgagtcctacaggatt
gttcaaagatattatattgacaggtgcactggaaaaactctacaaaaactccttttgagg
gtgaaagaaagaaaaacatacacagaccatgaattggacgatgatgaaattgagggcaaa
agatcatacaagattgaagataaactcacatcagacaagtataacaaagactatgtgaaa
aagcttcatggcgaagaattcaacttgaggtacctacaagagaatgggttacagtatcca
atcttgtttgcagagaagaatgggcttggtctaagagttccaagtgataatttcaaagtc
tgcgatgtgaaagcatgtgttggatcacgcagaatgttggatgttatggatgtaaacaca
cagaagggtcttgaaatgacaatgaaggaatgggttaagtactacgaaaacacagagagg
gaccgtctcctcaatgttataagtctggagttcagtcacacaaagctagaaaactatgtg
gaatcacctaacctggtacgtgaagtagactgggtggatacagcgtggcctcagcatctc
aaagattgtcagacagaatcaacaaatgccattgataagatgaagtacccgaaagtacag
aagtactgtctgatgagtgtggcggggtgttacacagatttccacattgattttggcgga
acttctgtatggtaccatatcctgcatggagaaaagattttctggttaattcctcccact
gataaaaatctggcaaagtacgagaactgggtgctgtcaggaaaacaaggcgatgcattt
ttagcggattccattgaggagtgtcagatgattcagcttgtggctgggaatactttcatc
attccatcaggatggattcacgcagtgtttacaccaaaagattctttggtttttggcggg
aatttcctacacagcttcaatatggtcaaccagctcaaagtgtcatccatcgaagataaa
acacatgtaccaatgaaattccgctacccgttctatgcagagatcaactggtatgttcta
gaacgttatgtacactcgttgactggcgtgacgtacctagagaaaccacagctcaatgag
gatcttgaagtcatcaacaccaaggtagagagagatcaggctaactttgaactgctggaa
gaaaaactaaataagaggctgtctgtgtcactgacaaggatagacgacacctccccggga
cgtaaatcaaccagtgatgatgatagtacagcttctggaccaaccagatcaccaggtcaa
gcttcttcactacccagaacaggaaggaagtcttcctcagagagtgctaattccttggat
ttgaaatcagtcgataaaccggaaattatgaaagtgccgtacaaaagtccggtgaagaag
aaaacaaaatacgtacacctgactaaatatgaactggagggtctgatagaagtgctagca
tgggtagaaagtttgcctcctagtaagaaagggattccaaaggatctgattgacccagat
acggtgcttagggaagtcaggcatttgatccaggagcatatgaaagacaatccagaactt
gctataacaggagaaccagtcttggaatggacaaaggcaactaagaaactgatcaaatta
aagcagaaagccaagacagccaaattgctaggtacacactgtgtaccaaaggtaaaggca
gctggcgggaagaatgcagcagggaaccgacaccgccgtgtacgctgtaagaagtgcgaa
ccttgtactagggatgactgtatggagtgtaatttctgtaaagatatgcggaaatatggg
ggacctggacgtgccaaacagtcgtgtatcagtagacagtgtctggctcctattctacca
aagggaattgtgtgtctgatttgtaaaatgcctcagtgtctgttagacaaaccagtgaag
acagacggagctgttgacgatgatgcggaggactattcctcgtcgttgatggagtgtggg
atatgttgggagatcgttcacccgctgtgtctccgtaagaagaatgaaaacctgaacaat
gatggagtgctgaatgaagatcttcccaacagctggaagtgctcaaagtgctgttttgat
ggcaaagaaggaaaacttatggcaagagtattcaagggaggttggagaccaactccagcg
agtaccccacctcctctgtcagtgtcccctcccctacagccccagagtccagtaggtagc
ccaggagtgtttgtttcagaagggaaacgtgtcacactaaaccagggaatagatagtaag
aagacaatgccgaagttgtcgccaagcccagaacatagagagatagatataaaaccattg
aatggttcaacaagcagtcatactgaagatacccttccatcatcattggcaccagttcca
ttgaaggctgagatgttggatgatgagaagacacatgtcaagatggaagttactaataca
cttcctctgaagaatgaacctgctgaagaaaactttaaaacttactctaaaagaagctct
tcacctctcgaggagaatcctatgaaaaagaagaggaacatatcaccatccccaagtcga
gcttccaagtcttccagggtttctggcatgcccaaattatctccaggttccggtagaaaa
tcagcgaaaactgcaacaccggatttatcatccaaacgttcaaaacgcgagacaacccca
agatctgggactcgatgtacatacgattttgatgacgatgaagaattcatggacatttct
gcacccttgccagacaagggcaaagggaagggcgtcaaaggtcgtaaaaatcttcatctc
aaaactaaagactttggtgcaaatttggcctcaaatgtgaaaaacaaatctcatacgcaa
actgttgaaccaaaaccagaagaccgtggccatcttacaaaaaaatcatctgaaaaattg
tgcagtgaacagcttagacagactctgatctcacatatcgaaaagcgcaatcttccgata
ataaagccgcagtttgtagttaggcctgctcccatatctcctccagatgattactgtgtt
atgaacaatggtcagaaacaccccctttcgcgtaaattatggacatatattttcagcttc
cttccatgtgccgatttggcacgttgccaagctgtttgtcagatatggaacagatggtgt
attaatcctgacctctggaagaaaatagatctgagtaaaaaaaggattgttcagacccat
ttgatgggcattgttcggcgacagccggaatatctggaccttagtgcagtgataatgaca
caaaagcaaattttatggttacttgaaagaattcctttgttgaaaacattaatcgtatca
aaatgttcttgggcgacgataagcggactctgcatgtcagcatgccccttgctttacaaa
cttgacgttagttgggctactggtctgaatgacagatgttttgaggatctcatttctcca
cctgttgaccggaaaccggctgtgaaaaatatcagccgtctgcatcgattgaagtctgta
catttgtctggaacagagatcactgatgtatcacttgagctaatgacattacatctggcg
caacttgaggaattgaatatcagttattgtacaagaataacagatcggggaatccagatt
ttggcaagtagcaaatcaccgacacaagattccttgaaagtattaaacatttccggttgc
cgggggcttacagaggtcagtttggacgctataaagaatttcagcaagttgaaggaactg
tttgctatgaactgcatcagaatccctacagaaaggtgcagatctctccgccacccgcgc
ttgaaaacattcagattttag

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