Mercenaria mercenaria (northern quahog): 123547119
Help
Entry
123547119 CDS
T07835
Name
(RefSeq) nuclear hormone receptor HR96-like isoform X1
KO
K08536
liver X receptor alpha
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123547119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmer03000
]
123547119
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmer03310
]
123547119
Transcription factors [BR:
mmer03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
123547119
Nuclear receptors [BR:
mmer03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
123547119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
123547119
NCBI-ProteinID:
XP_045189877
LinkDB
All DBs
Position
9:52202284..52480191
Genome browser
AA seq
490 aa
AA seq
DB search
MMFSDYGGRPGPPPQWNQPHPHQQLYGPPGPYNQGPSPHQMGGAVFPPRHRIDPTSEVFT
CLFGDLFVKCFEDSNSNGYGDGIPNPYRPMDLRPDYNGIEPMHKSRKNKEDKYCGVCGDR
ALGYNFDAISCESCKAFFRRNAPKGLDYFKCPYEEKCKMDVSNRRFCKRCRLRKCFEIGM
RKEYILTEEEKMRKKQRIDDNRYGRMRDLEKKMSQSGVVTSSSTQKLRPLEPAEEAVIGE
IVQAYRASLSIPIESKVPRDNANFAALVNIAEVSVRRVVDMAKKLKAFKALSQTDQIGLL
KGGSIELLILRSVISFDKENNYFLDPYDKDSLAMSADQLREGIEKPGVDVGGLPGFSQAG
GLFDEHMKFVKSLAIDLKADETVLILLLMLSLFSPDRPCVQDKVYISAEQDKYALLLQRY
LESKYPSHVVRSIYPKLLMKLTDIRNLNEEHSQVLLKLNPEGIQPLMKEVMDLHLKKSET
DSDSSSVASP
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatgttttctgactacggtggtcgcccagggccacccccacagtggaatcagccccat
ccacaccaacagctgtatggacccccaggaccgtataaccagggtccgtcaccacatcag
atgggtggtgcggtatttcccccacgccataggatcgatccaactagtgaagtgttcact
tgcttatttggggatttatttgttaaatgttttgaggactcaaacagtaatgggtatggg
gacggcatacccaacccttacagaccaatggatctgcggcctgattacaatggtattgaa
ccaatgcacaaaagccgtaaaaataaagaagacaaatattgtggggtgtgcggggatcga
gctctcgggtacaacttcgatgccatatcatgcgaatcgtgtaaagcgttctttcgacga
aatgctccaaaaggactggactactttaagtgcccttatgaagagaaatgtaaaatggac
gtgtcaaataggaggttctgcaagaggtgtcggttaaggaaatgttttgagataggaatg
cggaaagaatacatcctgacagaagaagaaaagatgagaaagaaacaacgaattgacgac
aacaggtatggacggatgcgagatctcgagaagaaaatgtcacagtctggagttgtcaca
tcatcatcaacacagaagctccgcccactcgaaccagcagaggaagctgtcattggtgaa
atcgtacaagcgtaccgtgcatcgctgtctatacccatcgagtcaaaggtgccaagagat
aatgccaattttgccgcgctagttaatattgctgaagtcagtgtacgtagggtagttgat
atggccaaaaaattaaaagcctttaaggctctttcacagactgatcagattggtttactg
aagggaggaagtatagaattgctcattcttagatctgttatttcatttgataaagaaaac
aattattttctagatccttatgacaaggattcgttagccatgtcagctgatcagcttagg
gagggcatcgagaaaccaggcgttgatgttggcggtttgccaggattcagtcaagccggt
ggactatttgacgagcatatgaaatttgtcaaatctttggcaatagacttaaaagccgac
gagaccgtgttgatattactgctaatgttatcactgttctcgcccgatcgtccctgtgtg
caggataaggtgtacatttctgcagagcaggataagtatgccctgttacttcagcggtac
cttgaatccaagtaccccagtcatgtagttcgtagcatctacccaaagcttttaatgaag
ctcactgatattcgcaacttgaacgaggaacattcacaggttttgttgaaactgaatccg
gaaggcattcagcccctaatgaaggaagtgatggatttacacctgaaaaaatcggaaacg
gacagtgattcatcgtcagttgcatcgccatag
DBGET
integrated database retrieval system
