Mercenaria mercenaria (northern quahog): 123548405
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Entry
123548405 CDS
T07835
Name
(RefSeq) short transient receptor potential channel 7-like isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123548405
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123548405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ank_2
Ion_trans
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
123548405
NCBI-ProteinID:
XP_045191556
LinkDB
All DBs
Position
6:complement(81527856..81845594)
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AA seq
1098 aa
AA seq
DB search
MSTSSCETVFSIGEISKLKVRTKRIQQKLYEDREQNDTAFLNPRQNENGDAILQPKSKRS
ASRLTFEKIGGHHRTLSSLEEDFIYAAEFGDIPTVQRVLDENPSLNVDFSDILGRTPLRL
AVGNEHLEVVELLLDRSNLANIYEALLQAISSGHEQIAESILKHPKYQGMKKEHKHFGET
DHFFNTASEDSPFSSDITPLILAAERNQFEIVQLLLLRGETIRKPHHYYCNCQECSNKLE
FDQLRLAKTRLNAYRGLCSGAYISLSSKDPILTAFELARELRGVAKVEKYYKTEYLELAD
QLSVYVVKLLDKVRGHDELAILLDKTGRDSEVETYERLARLKLAIQYSEKKFVAHSSCQQ
KLVSIWYSDLRALERSNWFFRSMLVSFITFGYPFMCILYLLAPKSQIGQFLRYPCIKFIG
HTMSFVAFLVMLLTSSMMENPRDLSQLSNFKEQYKYYGTFRTKSPYVLFRNQSFPSDFKL
RPFTPQTINIILSIWIIGMLWQELKQVYSEGIYNYFEALYNYLDFAVLTLYITSFTLRFL
TLIKVQHALEYFKLESNWEKLQNQTASAEEEFYWLIADRLYWDSWDPHNIAEAIFAVANV
ISFSRLSYILPAHELFGPMQISVAQMITDFLKFLAVFSVFFVAFMVGLHNLYWYYPKEVR
NQVELVKNDITTTAEEHFGIPHITFRTVFWSLFGRGEPTAVEVEPFGHKTTETVGYWIFG
AYNFCTVIVLLNMLIAMMSRSFELIQGQADTEWKFARSKLYMEYIKDESTLPIPFNIIPS
PKTIFYIFKTVFGCFCCCTGDEGEQTIAHPGRVVDLEMFPPSTVGGQVSPAARQNVQISW
DERENHGGPGIKHFQEKMQTSNGFVRNDSDPNLFSDKLTYKRVMKRIVKRYIFDVQREND
ANDDFDEIKQDISSFRYEMLNHIAVRQLETTDNKERLEKLYSTMDAMLTQQKLIMKMTGD
RSFTSSEDSSEQAGSTLSRSVSSSVYSDDDTGMVSKKRSPTSSLKDIPEEDKSDTAAGDS
KKPTKTNLFDKIREDIFRRQSSFDRDTFDSEDTTITQTSTDHAHASEKKNVISDRDINVE
VEIKSPSKLGMFRGGKKL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaagttgcgaaactgtattttctatcggggaaatatcaaaacttaaagtt
cggacaaagcggatccaacagaaactgtatgaagacagggaacaaaacgatacagccttc
ttaaacccacgtcagaatgagaatggtgatgcgatattgcagcctaagagtaaacgatcg
gcctcaagacttacatttgagaaaatcggcggccaccaccgaactttgtcatctcttgaa
gaggattttatttatgctgcggagtttggagatataccaacagttcagcgtgttctcgac
gagaatccgtctctcaacgtggacttcagcgacatattgggacgtacacctctgcgtctc
gccgtcggaaacgaacatcttgaggttgtggaactacttttggacagaagtaatctggcc
aatatatacgaagcattgttacaagccattagttctggacatgaacagatagcagagtct
attctcaaacatccgaaatatcagggaatgaaaaaggagcataaacattttggtgaaact
gaccatttcttcaacaccgctagcgaagactctcccttttcatcggatattacgcccttg
attttagcggcggagcgtaatcagtttgaaattgtgcagcttttattattgcgaggggag
acaattcgaaagccccatcattactattgcaactgtcaagagtgtagtaataagttagag
tttgatcaactcagactggcaaaaacacgacttaatgcatacagaggcctttgcagtgga
gcgtacatttcactttccagtaaagatcctattttaacagcttttgagcttgcgagggag
ctcagaggggttgcgaaggtagaaaaatattacaagacagaatatttggaacttgcggac
caattaagcgtgtacgttgtaaaattactagacaaggtcagaggtcatgatgaactggca
atcctcctcgataagacaggccgggacagtgaggtggagacgtacgagagacttgcaaga
ctcaaactcgccatccagtacagcgagaaaaagtttgttgctcactcgagttgccaacag
aagttggtcagtatatggtactctgatttgcgagctctggagagatctaactggtttttc
cgctcaatgctggtctcatttatcacatttggctatccattcatgtgtattctttacctt
ttggcgccaaaatctcagattggtcagtttctgcgttatccgtgcatcaagttcattggc
catacgatgtcttttgttgcgttcctcgtcatgttgttgacctccagtatgatggagaat
ccacgcgacctgtcacaactatccaactttaaagaacaatacaaatattacgggactttc
cgaaccaaatccccttatgttttatttcgcaaccaaagttttccatctgattttaaactg
cgaccatttacaccacagactattaacattattctgtccatatggatcattggtatgttg
tggcaggagctgaagcaggtgtactcggaaggaatttacaactacttcgaggctctctac
aattatcttgactttgccgtcctcaccttatacatcacgtcgtttactcttagatttctt
acattaatcaaggtccaacacgcacttgaatacttcaaattagagagtaattgggagaaa
cttcaaaaccagactgcatcggcggaggaagaattctattggctcatagcagatcggttg
tattgggattcctgggacccacacaacattgccgaggcgatatttgccgttgctaatgtg
ataagttttagcagattgtcttacatccttcctgcacacgagttgtttggaccaatgcag
atatccgtagctcaaatgataacggactttcttaagtttttggcggtgttttctgtattc
tttgtcgcatttatggtgggcctgcacaatttgtactggtattatccaaaagaggtgaga
aatcaagtggagcttgtgaaaaatgatattacaacaactgccgaggaacattttggaata
ccacatataacttttcggacggtgttctggtcattatttggccgtggagagccaacagca
gtagaagtggagccgttcggacacaaaacgacagagaccgtcggctactggatatttgga
gcgtataacttctgtacagttattgtattgctcaacatgctgattgccatgatgtcaaga
tcgtttgagcttattcagggtcaagctgacacggaatggaaattcgcaagaagtaaactc
tatatggaatacattaaggacgaatcaacattacctattccatttaacatcattccatca
ccaaaaacaattttctacattttcaagacagtgtttggctgtttttgttgttgtacggga
gatgaaggggaacagactatcgctcatcctggcagagtagtcgaccttgaaatgtttccg
ccatctactgttggcggacaggttagtccggcagctcgtcagaatgttcagatatcttgg
gacgagagagagaatcacggcggaccagggatcaaacattttcaagaaaaaatgcaaaca
tctaacggattcgttagaaatgactctgatcctaacttgttctctgataaacttacatac
aagagagttatgaaaagaatcgtaaaacggtacatatttgatgttcaaagagaaaacgat
gcaaatgacgactttgatgagatcaagcaggacatcagtagcttcagatacgagatgttg
aaccacatagctgtccggcaactagagaccacagacaacaaagaacgccttgaaaagcta
tattcaacaatggacgcaatgttgacacaacaaaaacttataatgaaaatgactggagac
aggtctttcacatcatctgaagacagttcagagcaagcgggatcaacgttgtctcgatct
gtttctagttccgtatactcagatgatgacacaggtatggtgtctaagaagcgatcaccg
acatctagtcttaaagacataccagaagaagacaaatcagacactgctgcaggtgacagt
aagaaacccactaaaactaacctgttcgataaaattcgagaagacattttccgacgacaa
tctagtttcgatcgtgacacatttgacagtgaggatacaactataacacaaacctcaact
gatcatgcgcatgcgtcagaaaagaagaatgtgataagtgatagagacataaacgttgaa
gttgaaattaaaagcccgagcaaacttggtatgttcaggggagggaagaagttatga
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