Mercenaria mercenaria (northern quahog): 123551504
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Entry
123551504 CDS
T07835
Name
(RefSeq) F-box/WD repeat-containing protein 7-like
KO
K10260
F-box and WD-40 domain protein 7
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123551504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123551504
04121 Ubiquitin system [BR:
mmer04121
]
123551504
Membrane trafficking [BR:
mmer04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
123551504
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
123551504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_DCAF12
NBCH_WD40
ANAPC4_WD40
WD40_like
Beta-prop_EIPR1
Beta-prop_SPT8
F-box-like
PALB2_WD40
WD_LRWD1
Beta-prop_WDR19_1st
Beta-TrCP_D
Beta-prop_NWD2_C
F-box
Motif
Other DBs
NCBI-GeneID:
123551504
NCBI-ProteinID:
XP_053398114
LinkDB
All DBs
Position
4:complement(39632987..39684132)
Genome browser
AA seq
682 aa
AA seq
DB search
MTSVEVQSTPDAGLPSLSRKAGLKKRIKGSTPPPPMNADDIPWRGHGGRAPTMSSVEFDR
QLDKIAVWLEEWSHEQRCQIVEGILRRSNYNQFQFLNTSLQPILHRDFMYTARTQFPAIE
FQPVSTHTSRKLKTEVKQQIQERESLRLPQLSRSNGVSPVDVTDKPMAHLLTVTPRKKLR
RSPSLDKNGVDKWVGEGNPLYSSQPNLSQYSNIRYIDMPIRRHIQDENSPRQGSHVKSAT
TTILSSNTGLTKSSNLSTVHRSNSHLNAHRKPKLKHKGEGSSALNVPNLSLPDEAGTLFS
WYTQNWSDVKRNEFLHKFMLKLDPRQHYFVSSFLAVCKTWNALANNNDLWKHKCETVKME
VPVSDQPEWKKLYKDNKYLRVNWNSAKCKITDFKGHSDSVICVIFDHLHLASGSLDKTIR
VWNLKTGKCQHVLKGHVKGVWCLNFFTHNLLVSGSYDGTIRVWNLRTGKCNKTIIAHDGP
IWALTRHNEVLVTVSQDKTAKVWDINRCLHLNSLLGHTAAIFAVDMSEDGHLVITGSADK
SVKIWNIETGRCLRWISVSQTTSIMSVSYSQGHLACSYGETICVYKVEGPTRLIKKYLDI
VNEHQKRIECLKLGILDKEKGDGIIVSAGKDGAVKYWDIQKDKSIQTFVGHRGREVNAIY
FDELRIASAAHDNKIRIWDFNV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgttgaagtacagagcacccccgatgctggacttcccagcttgtcacgaaaa
gcaggtcttaaaaaaaggataaagggttcgactcctccgccaccaatgaatgctgatgat
attccgtggaggggacatgggggtcgcgcccctactatgagcagtgtggaatttgataga
cagcttgataaaatagcggtatggctggaagaatggagtcatgaacagagatgtcagatt
gtggagggtatattacgtcgcagtaactataaccagtttcagttcttgaacacatcgtta
caaccgatcctgcacagagatttcatgtacacagcacgcacgcagtttccagcgatagaa
ttccagcctgttagcacacacacaagtagaaaattaaagactgaagtcaagcaacaaata
caggagagagaatctctcagattacctcagttatcgaggagtaatggggtatctcctgta
gatgtaactgataagcccatggctcatcttttgactgttaccccgagaaaaaaactgcga
cggagcccaagtcttgacaagaatggtgtggacaaatgggtaggggaaggaaatcccctg
tattcaagtcaaccaaatctaagtcagtacagcaatatcagatatatagatatgccaatt
cgccgtcatatacaggatgagaacagcccgcgccagggctcacacgtcaagtctgctacc
accacaatattgtcttcaaatactggtctcactaaatcatcaaatttgagtacagtccac
aggagtaacagtcatctgaatgctcatagaaaacctaaacttaagcacaagggtgaagga
agctctgcattaaatgtgcccaatttatcccttcctgatgaagctggtaccctgttcagc
tggtacacacaaaactggtcagatgtaaaaaggaatgagttcctgcataagtttatgctc
aagttggacccaaggcagcattactttgtttcaagttttcttgctgtatgtaaaacatgg
aatgctctagccaataacaatgatctgtggaaacataaatgtgaaacagttaaaatggag
gttcctgtgagtgatcagccagaatggaagaaattgtataaagacaataaatatctgcgg
gttaactggaacagtgctaagtgtaaaataacagacttcaaagggcattctgacagtgta
atatgtgtaatatttgaccatttgcacctggcgagtggaagtttggacaaaaccataagg
gtttggaatctaaagactggcaaatgtcagcatgttctcaaagggcatgtaaaaggtgtc
tggtgcctgaacttcttcacccacaacctcctcgtcagtgggtcatatgatggaaccatc
agggtttggaacctgaggaccggcaagtgcaacaagactataatagctcatgatggacca
atctgggccttgacaagacacaatgaagttctagtcacagtatctcaggataaaactgca
aaagtttgggatattaacaggtgtctacatttgaacagtttacttggtcacacagcggct
atatttgcagtagatatgagtgaagatggacacctcgtcatcacaggatctgcagataag
agtgtaaagatctggaacatcgagactggcaggtgtttgagatggatcagtgtcagccag
acgacgtccatcatgtctgttagctatagtcaaggtcatttagcatgttcatatggtgaa
actatctgtgtctacaaagttgaaggtccgacaaggctgataaagaaatatctcgatatt
gttaatgaacatcagaaaaggatagaatgtttgaaactcggcatacttgacaaagagaag
ggagacggtataattgttagtgctggtaaagatggggcagtcaaatactgggatattcaa
aaggacaaaagtattcagacatttgtgggccataggggacgtgaagtgaatgccatctat
tttgatgaactacgtatcgcaagtgctgctcatgataacaaaatccgaatatgggatttc
aacgtataa
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