Mercenaria mercenaria (northern quahog): 123558007
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Entry
123558007 CDS
T07835
Name
(RefSeq) uncharacterized protein LOC123558007 isoform X4
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmer04054
]
123558007
Enzymes [BR:
mmer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123558007
Pattern recognition receptors [BR:
mmer04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123558007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
CARD
Motif
Other DBs
NCBI-GeneID:
123558007
NCBI-ProteinID:
XP_045205803
EnsemblRapid:
LOC123558007
LinkDB
All DBs
Position
5:96624964..96669455
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AA seq
896 aa
AA seq
DB search
MGGCTSKTSSKKHDKANSNFPAELVFRRECPWRERTTYQDPSGVLPTEIKETVLQDKWFD
RIKEPAGVEKTYMDSDKKLNLKLIAEDDHYDLINEMEMDQSPLPNKNTRTPGRRLPELPE
RSKCDKKKFRVSCKRKSAIKNELDISMDEQRSQCLEYSEMVNIFKPLIVNTLLVEDILPS
LSFLDNHDDIYAQMRIYSPKDLVVSLLDDLERSEELGKWQKFIDALSANGYTYIVDNIRG
YKFISPEYQTEYIRKLKPKIGKMIKTQKLLPHLLDKRLISNSDNEIILREIVNHGNFAAA
AELLGKLNQKHRNWYKLFIEALQEANMDDVAVCLNIPELLESRRSNGTDICVKKNSSKLP
MNSQSTLPTPNISKEEEKSQCSEFTEMVKIFKPLIVQNLLVVDILPSLPFLENHDDIYAD
MKNHSPKKAVLSLLDEMERSEELEKWQKFIDALVENGYTYIVDNIRGYKFISHEYQEEYI
RKIKPKLCKMINTRELLLHLLAKNVISDSDNENIQRENANHGNIAAAMMLLDRIHKKHRN
WYKLFIEALQEANMDDVAICLQIPDLLETNRTKKTDVCQNDVDTYYDDTQFYYKESDVSE
YQTPKKSETCRIYAFEGSQDGNYTNRQFQKDQDDGDILYCIPPVTKDTDLDKLQSKGNLL
VEDETTEQYEEPIPQRVPINEKRKVPLPIWTNADLEQFVNEVITLQSEGVKTDGNEALES
KSNVESLRSKSLKDECEQMQIEYDDLQIQIDRLKEKASINEKLNTALRKVRELERVNELR
EKERQALKTTDLTTEDDVDVDADNIDTYYPTAAKPNQHVRRETATAIHDVWTKQTHDFRE
PFLLEACKYSKLPNFILDSTLSVVQVFSPTFDSRSIINQMFEQDSGVGTDMALGFD
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggaggatgtacttcaaaaacgtcttcaaaaaagcacgacaaagcgaactcaaacttt
ccagctgaactagtcttcagaagagagtgcccatggcgagaaaggacaacatatcaagac
ccatctggagtattacctacagagataaaggaaacagtgttgcaagacaaatggtttgac
agaataaaggaacctgcaggtgttgaaaagacttacatggactcggacaaaaagcttaat
ctcaaactcattgccgaagatgaccattatgaccttatcaacgaaatggaaatggaccaa
tcacctcttccgaacaagaatacacgtacgcccggacgtagattaccggaactgcctgaa
cgttcaaaatgtgataagaaaaaatttagagtttcgtgtaaaaggaaatcagcgataaag
aatgaactggatatttcaatggatgagcaaaggagccagtgtttggaatacagtgaaatg
gtcaacatcttcaaaccactgatagtcaacacactgcttgtcgaagacatcctaccgtcc
ttatcatttctagacaatcacgacgatatttatgcacaaatgagaatatattcaccaaaa
gatcttgttgtgagcctcttagatgatttagagagaagcgaagaacttggaaaatggcaa
aaattcatagatgctcttagcgccaatggatacacatacattgttgacaacattagaggc
tacaagtttatcagtcctgaatatcagacagaatacatcagaaagctcaaaccaaaaatt
ggcaaaatgataaagacacagaagcttcttccacatcttctggataaacgtcttataagc
aacagtgacaatgaaattattctacgagaaattgtaaaccacggtaattttgcagcagca
gctgaactgctgggtaaattaaatcaaaagcatcgcaactggtacaagttatttattgaa
gctcttcaagaagcaaacatggacgacgtcgcagtttgtctaaacatacctgaactgtta
gaaagcagaaggtcaaatggtacagatatttgtgtaaagaaaaacagctcgaaactcccg
atgaacagccaatcgacgttacctactccgaatatttcgaaagaggaagagaaaagtcaa
tgttcagaatttaccgaaatggtgaagatttttaagccactcattgttcaaaatctgctt
gtcgtggacattctaccgtctttgccattcctagaaaaccatgacgatatctacgcagac
atgaaaaatcattcaccaaaaaaggctgtgttgagtctcttagatgaaatggagagaagt
gaagaacttgaaaaatggcagaaatttatagatgctcttgtggaaaatggttacacatat
attgttgataacattagaggctacaagtttatcagtcacgagtaccaggaagaatacata
agaaagatcaagccaaagctttgcaaaatgataaacactcgcgagcttctactacatctt
ctggctaaaaatgtgataagcgacagtgacaatgaaaatatccaacgtgagaatgcaaac
catggtaatattgcagcagcaatgatgctgctagacagaatacacaaaaagcatcgcaac
tggtataaattattcatagaggctcttcaagaagcaaacatggacgacgtcgcaatttgt
ttacagatacccgacttgttagaaaccaacaggacaaagaaaacagatgtttgtcaaaat
gatgtcgacacttactacgatgacacacaattttattataaagaaagcgatgtgtctgaa
tatcaaactcccaagaagtcagaaacatgtagaatttatgcatttgagggcagtcaagat
ggaaattatacaaacaggcagtttcaaaaagatcaagacgatggcgacattctctactgt
ataccacctgttactaaagacacggatttagataagcttcaatccaaaggtaacctgcta
gtagaagacgagaccacagaacaatatgaggaacccattcctcaacgggtaccaataaat
gagaagagaaaggttccccttcctatctggacaaatgctgatttagaacagtttgtaaat
gaagtgataacactgcagtcggaaggggtgaaaacagacggcaatgaggcattggaaagc
aaatcaaacgtagaaagtctaaggtctaaaagtctaaaagacgaatgtgagcaaatgcag
attgagtatgatgatcttcaaatccaaattgatcggctcaaggaaaaggcttcaattaac
gaaaaacttaacactgcattaagaaaagtacgtgaacttgaacgagtaaatgaactcaga
gaaaaggaaagacaagctttgaaaacaacagaccttactaccgaagacgatgtagacgtt
gatgctgacaacatagacacatattaccctacagcggctaaaccaaatcagcatgttcgt
agagaaacagctactgcaatccatgatgtttggacaaagcaaacacacgatttcagagag
ccatttctgttagaagcctgcaaatattcaaagcttccaaactttatcttagattcgaca
ttatctgtggtacaagtttttagcccaacctttgacagtcggagcataattaatcaaatg
tttgaacaggacagtggcgttgggacggatatggctttgggattcgactaa
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