Mercenaria mercenaria (northern quahog): 123560852
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Entry
123560852 CDS
T07835
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmer04121
]
123560852
Enzymes [BR:
mmer01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123560852
Ubiquitin system [BR:
mmer04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123560852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3_DZIP3_dom
wHTH_TTC3
TPR_1
TTC3_9th
zf-RING_2
TPR_2
zf-rbx1
TPR_16
zf-C3HC4
TPR_11
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
TPR_19
zf-RING_5
zf-RING_11
zf-RING-like
zf_RING_Vps8_fungal
AGRB_N
RINGv
Motif
Other DBs
NCBI-GeneID:
123560852
NCBI-ProteinID:
XP_053408579
LinkDB
All DBs
Position
10:30931563..31015778
Genome browser
AA seq
2064 aa
AA seq
DB search
MSDSDLPDLVESSDDDSGDNEQAQKGLVYADTWLKKGEKYLEKQELWMRVFSLAPFLFGV
NNIISVAWNKALLNAKLLLTEKRNYETTFLEWQEWECLDLVDHVVTEVQSYFRNRNHLAK
SLDCAGRLDECKEGVVIDVDLALNEAHKVTEISDLWRSILKHEVSSGKEKAAKFAVLYVI
RIYREHVIFLCDKSQDFIEHTKKNHMRSNISGQKIAEEHKKKGNEYFKNENFDDAVHYYS
LAAKEDPFSHVYYGNRAQAFLSLKKYRDALADGRRAIIIKPDFPKGHYRYAVAFHGLGQL
DSAIRVNERGLELCLKSSTQDNQNIKELESQGHNLYQERADRNKSSVLTSIPKELDDKLA
SIPSPRTDITEKLGCTVPIKSRNDEPQCRGSSETDSDTPSTHDHKKVRRKKKSKAKSSTT
KDTSSKTEKVKEKSEDMVIPQEKRNGQSDAKSEQQQQLEEFKTYLSDASDSFMRQANKNA
MTSYQKALELVASSSNQKDFGMDDSDMLTLKYAFSISAIGTNNYKNIMDGIEKLEEIKDY
CETHDDIKFPVLYYGLGKAYVSLNRFPEAIDPLQDGYQVASSVTYPQVTWPGTKQLIKET
DPIVLQESLKNLLQLCKFPPPPDSVCRNHTDTTDKRTVIYLTDPDFKGYIKIICQMNCVI
TFHQVCFKSYKNSLNKQSDKDVLDTLCPTPDCVGYIMKVHVVRSDSLSKEYHSEKYVDFK
ENNKNKKPVAKQKTTNESKIAKKQDKKDKRKQKKKEHTDQELYTNNKQKLDDSDEVITDG
ASAMAFIADIENEVQALPDVKDTTVLRKDAIDVQKPGKSRKSKKKTKDKSKQILNVEVNF
SDRREETLLNENSVLSDEEKENMNKPEPIQNPFSVPTELKSQITNFEKTYTGPPKTALLS
KPDEVTENLFLYFVEILKANGPLAIDDTRIQQELEVFPQEALEKIKLVGGLADFLRQSLK
FAVIDDVISLMSDAVRAREIALIRRQERQNSGNEPAVQNAWKTVGKSVNNVDALSESLKT
NVTMAASISTSSSLNFSDVNSSVNSKTLSVLPNSNNSNSVSPFVDLPASTSQNNQGMHWS
EGVSSFDITNPIKPPVTVPAPVQVSTFDTLDSIDDLPIQDTSELKTKKDLDDIDDLDGLS
ESGSELKESQENGGYKNGLRLDPRLASLDIGKVDSNSRCSSKSDISERSYGSAFGNIGQP
KMPQMWDKLESDFDSSWSRGSREENQNVERNSVESVALEAKRLGEEFVRKSDETFVSELA
ESVVDKLYEGRRVSDSERTSTLNKVSADIWKDFERSANAGKKGVSSLWANTPAGADYSKN
MGKFATDFMKRHYNSERNLVSPTSDLSTLPPQKPSVTPDSFSSFSNHPGFNSTFPWPDGK
ASKEMQIQPSVSSNSGYNLFSGPTWGLDSFNSSSAPSAPAPLSVPPPKPMMPPPQGPFVR
PPLAVSGYYQHPNMQVPFRPPPRLPMPPPMAMPFPPQVRVEMKDKETQAILQVESIGTMT
EVYEPFKKEYLQMKENRDEAIRVMAESKSLYEKLLLEHKAKEQQILVLEADINNKVGMFD
LEKKSWKNDREAFVEEIKRLQEQVVTRDSQEKELKEKMIGQEKRVNELAILAKDQRDKDL
AEIKKCMENAEKYRHLHDTQLQRAVSAESEILKSKLQAAKSTLERSQKEASFHKQRLSGF
VQKHEEDNKPIPPPLQQAFEFMTSAVKKSEENLNSITVAYEEQIAKLKAGTPLADLEQIA
VPSPPPVPESIRGLPFMQPGMPGFMMPRMQFPNRPPFNNPGMVKVPSPVGAAPAAIGAPV
SAVPSKPTETVQQPVQAQVQSSIGNNNGLVATATQNHYNTSVPASVQGTPRPLVTPSAGG
GLSKPGQLPPRAPLAVPNRAPLRPIGIGGLAAQMSSFDKLVVKLKMTFPEKSRAELSQLI
HALRQKRGGSLSGMTMEDIIQQIAELITAQEQQAITGTLEQSSIQQAGSKAVGPPPGLNS
SWAFLTAGGSKLGSGKGLGSELYREEEEDPCVICHEEMDPKSIVTLECGHLFHDECIRKW
FQEQSTCPNCRVHTLLSDEFPSLG
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagatttaccagatcttgtagagtcatcagatgatgatagtggggacaat
gaacaagcacagaaaggattagtatatgctgatacctggctgaagaagggagagaagtac
ttggagaaacaggaactgtggatgagagttttctcccttgcaccattcttgtttggagtt
aacaatataatatcagtggcctggaacaaggcattgttgaatgctaaactcctgttgaca
gagaaaagaaactatgagacaacattcttggagtggcaagaatgggaatgcctggaccta
gtggaccatgttgtcactgaggtgcagtcatactttagaaaccgtaaccatctagcaaaa
agtctggactgtgcaggaagactggatgaatgtaaagaaggtgtggttatagatgtggat
cttgctctcaatgaggcccataaggtgacagagatatctgatttgtggagaagtatatta
aagcatgaggtgtcatctggcaaagaaaaagcggcaaaatttgcggtactctatgtgatc
cgaatatatcgggaacatgttatatttctgtgtgacaagtcacaagacttcattgaacat
acaaagaaaaatcacatgagatcaaatatttcaggtcagaagattgcggaagaacataag
aagaaaggaaacgagtatttcaagaacgagaactttgacgatgctgtgcactactactct
ttagctgctaaagaagacccattcagtcatgtgtattatggaaacagagcacaagcattt
ttatctctgaaaaaatacagagatgctctagctgacggcagaagagccatcataatcaaa
cctgactttccaaagggccactatagatatgcagtagcttttcatggacttggacaactt
gattcagcaatacgagtgaatgagagaggtcttgaactgtgcctgaagtccagcacgcag
gacaatcaaaatataaaagaacttgagtcacagggtcacaacttatatcaagagcgagca
gacagaaacaaaagcagcgtattaacgtccataccaaaagaactagatgataaacttgct
tctatcccaagtcctcgtactgacatcacagaaaaacttggctgtactgttccaattaaa
tccaggaatgatgaacctcagtgtaggggatccagtgaaactgattctgatacacccagt
actcatgaccataagaaagtgagacgtaagaaaaagtcaaaggcaaagagctctacaaca
aaggatacatcttcaaaaacagaaaaagtgaaagaaaagtctgaagatatggtaattccc
caggaaaagcgcaacggccaatctgatgcaaaatcagaacaacaacaacagctagaggaa
ttcaagacttatctcagtgatgcctctgactcttttatgaggcaggccaacaagaatgcg
atgacgagctaccagaaagccctagagcttgtagcttcaagtagtaaccaaaaggacttt
ggaatggatgattcagacatgttgacactgaagtatgcctttagcatatcagccattgga
acaaacaactataagaatataatggatggtatagaaaagttagaagagatcaaggattat
tgtgaaactcacgatgatatcaagtttcccgtgctgtactatggtctaggcaaggcctat
gttagcttaaacaggtttcctgaagctattgaccctctacaagatggttaccaggtggct
agtagtgtaacatacccacaagtaacatggccgggaaccaaacaactcattaaagaaact
gacccaatagttttgcaggaaagtttgaagaaccttctacagctgtgtaaatttcctcca
ccaccagactctgtgtgtagaaatcatacagatacgactgataaacgtactgtcatttat
ctcacagatccagatttcaaggggtacataaagatcatatgtcagatgaactgtgtaatc
accttccatcaagtgtgttttaaatcttacaaaaatagtctaaataaacaaagtgataag
gatgttttagatacgttatgtcctactccagactgtgttggttacattatgaaagttcat
gttgtacggtcagacagtctcagtaaagagtatcattcggagaaatatgtggatttcaaa
gagaacaataaaaacaaaaagccagttgccaaacagaaaactacaaatgaatcaaagatt
gctaaaaagcaggataagaaagataaacgtaagcagaagaagaaggagcacacagatcag
gaactgtacaccaacaacaaacagaaacttgatgactctgatgaagtcattactgacgga
gcaagtgctatggctttcatagcagatattgaaaatgaggttcaagccctgcctgatgtt
aaagacactacggtactcagaaaggatgctatagacgtacagaaacctggcaagagtcgt
aaaagtaagaaaaagacgaaggacaaatctaaacagattctgaatgttgaagttaacttc
tctgatcgacgggaggaaactctgctaaatgagaactctgttcttagtgatgaagaaaag
gaaaatatgaacaaacctgaacctatacaaaacccattctctgtacctacggagctgaaa
tcacagattacaaattttgaaaagacctacactggtcctcctaaaacagctttgttgtct
aaaccagatgaagttacagaaaatcttttcttgtattttgttgagattctgaaagcaaat
ggtcccctggcaatagatgacactcggatacagcaagagttggaagtgttcccacaggaa
gctttggaaaagattaaattagttggtggacttgcagactttttaaggcagtcactcaag
tttgctgtcatagacgatgttatttcacttatgtcggatgctgtgcgtgcacgtgaaata
gctttaattcgcagacaggaacgtcagaattctggcaatgagccagcagttcaaaatgct
tggaaaacagtcggaaaaagtgtgaataatgttgatgcattgagtgaaagtctaaagact
aacgttacaatggctgcctcgatttctacttcttcaagcttaaatttttccgatgttaat
tcaagtgttaattccaaaactttatctgttttaccaaattcaaacaattcgaatagtgtt
tcaccatttgttgatttacctgcttctacttctcaaaataaccaagggatgcactggtca
gagggtgtgagcagttttgatataacaaatccaattaaacctcctgtgactgtaccagca
ccagtgcaagtgtcgacttttgacactttggactcaattgatgatttacctattcaagat
actagtgaattaaagacgaaaaaagatttggatgacattgatgatttagacggactttca
gaaagcggaagcgaacttaaagagagtcaggaaaatggaggttataagaatggtttaaga
cttgatccaagactggcttctttagatattgggaaagttgattcaaatagcaggtgtagt
tcaaaatcagatataagtgaaaggagttatggaagtgcttttgggaatattggacaacca
aaaatgccacaaatgtgggacaagttggaaagtgattttgattcttcctggagtcgagga
agtagggaagaaaatcaaaatgtagaaaggaacagtgttgaaagtgtggctcttgaggca
aaaagacttggtgaggaatttgttcgaaaatctgacgaaacttttgtgtcggagttagca
gaatcggttgttgataagttgtatgaaggaagaagggtgtctgatagtgaacgtacatcc
accttgaacaaagtatctgctgatatttggaaagactttgaaagaagtgcaaatgcaggg
aagaaaggagtatctagtttatgggcaaatacaccagctggagcagattatagtaagaat
atggggaaatttgctacagattttatgaaacgtcattataactcggaaaggaatttagtt
tctcctacttcagatttgagtactttaccgcctcagaaaccttcagttactccagatagt
tttagttctttttcaaatcatcctggttttaattccacttttccttggccagatggaaag
gccagcaaagagatgcaaatacaaccttcagtttcatcaaattcaggatataatcttttc
tcgggccccacttggggattagattcttttaatagcagttctgctcccagtgcaccagct
ccattaagtgtcccacctccaaaacccatgatgcctcctccacagggaccatttgttcga
cccccattggcagtgtctggatattatcagcatccaaacatgcaagtaccttttcgacct
ccaccacgtttgccaatgcctcctccaatggcaatgccatttccaccacaagttcgagtt
gaaatgaaagacaaagagacacaagccattttacaagttgaatcaatagggactatgaca
gaagtgtatgaacctttcaagaaagaatatcttcaaatgaaggaaaatcgtgacgaggcc
attagagttatggcagagagtaaaagtctttatgagaaacttttacttgaacataaagct
aaagaacaacaaattctggtattagaagccgatattaacaataaggttggtatgtttgat
cttgagaagaaatcgtggaagaatgatcgagaagcatttgtagaggagatcaagagactt
caagaacaagttgttacaagagatagtcaggaaaaggaattgaaagaaaagatgattgga
caagaaaaacgagtgaatgagcttgctatacttgccaaggatcaaagggacaaagatttg
gcagagattaagaagtgtatggaaaatgctgaaaagtacagacacctccatgatacacaa
cttcaacgtgcagtatctgctgaatctgaaatactaaaatcgaaattgcaggcagcaaaa
agtactctcgaacgctcacagaaagaggcttcatttcacaaacagaggctgtctggtttt
gtacaaaaacatgaagaagataataaacctatacccccacccctgcagcaggcgtttgaa
ttcatgacatcagctgtgaaaaaatcagaggaaaatcttaatagtattacggtcgcttat
gaagaacaaatagcaaaattaaaagcagggactcccctagccgaccttgaacaaatagcc
gttcccagtcctccccctgtaccagaatcaatacggggtttaccgttcatgcagccaggg
atgccaggttttatgatgccgagaatgcagttccctaataggcctccgtttaacaatcca
ggtatggttaaggtaccatcaccagtaggtgctgctccagcagcaattggagctcctgtg
tctgcggtgccatccaaacctacagaaactgtgcaacagccagtgcaagcccaggttcag
tcatctattggcaataacaatggacttgtggctactgccactcagaaccattataacact
tcagtgccagcatcagtgcagggaacgcccagacccttggtgacaccaagtgctggtgga
ggactttctaaacccgggcagttaccacctagagcccctctagctgtaccaaacagagcc
ccactgcgcccaattggtataggaggtttggccgcacagatgagcagttttgataaattg
gtggtgaaattaaagatgacattccctgaaaaatccagggctgagctgagtcagttgatc
catgccttacgtcagaaacgtggcgggtcactgtctggtatgacgatggaggacattatc
cagcagattgccgagttaattactgcacaggagcagcaggcaatcactgggaccctggaa
cagtccagcatacagcaggctggtagtaaggcagttggacctccacctgggctgaacagt
tcttgggcattcctgactgctggtgggtcaaagttggggtcaggcaagggtttgggctca
gaactgtacagggaagaggaggaggatccttgtgtcatttgccatgaggagatggaccct
aaatcaatagtaacactggaatgtggacatcttttccatgatgagtgtattcgtaagtgg
ttccaggaacagagcacatgtccaaactgtcgagtacacacactcctgtcagacgagttt
ccatcgttgggataa
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integrated database retrieval system
