Mercenaria mercenaria (northern quahog): 123563464
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Entry
123563464 CDS
T07835
Name
(RefSeq) toll-like receptor 4
KO
K10159
toll-like receptor 2
Organism
mmer
Mercenaria mercenaria (northern quahog)
Pathway
mmer04145
Phagosome
mmer04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
123563464
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
123563464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmer04131
]
123563464
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmer04147
]
123563464
04054 Pattern recognition receptors [BR:
mmer04054
]
123563464
04090 CD molecules [BR:
mmer04090
]
123563464
00536 Glycosaminoglycan binding proteins [BR:
mmer00536
]
123563464
Membrane trafficking [BR:
mmer04131
]
Endocytosis
Phagocytosis
Toll-like receptors
123563464
Exosome [BR:
mmer04147
]
Exosomal proteins
Exosomal proteins of breast milk
123563464
Pattern recognition receptors [BR:
mmer04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
123563464
CD molecules [BR:
mmer04090
]
Proteins
123563464
Glycosaminoglycan binding proteins [BR:
mmer00536
]
Hyaluronan
Cell surface receptors
123563464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
TIR_2
LRR_4
LRR_14
LRR_EndoS
LRR_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
123563464
NCBI-ProteinID:
XP_045212234
LinkDB
All DBs
Position
2:complement(21293932..21297948)
Genome browser
AA seq
863 aa
AA seq
DB search
MEARLIIFLLVVRGVVISVPFFCGPDGICLCEAYNQMDCSKTNLSMSKVCGFIRNSSIFN
VSVLRLELNDYQMIKKFDLEGCDELNELYLGQNEISSIENGSFARFDRLELLDINNNCLA
IYNGTVQQGFKFPLTTKALKLNGNSKADTSGQVSYPDLSYLSNLEVLYMDGLKDKMFPEF
YRMIKTLQKLVLSGLNGNCNISVITNSTLQNLLHVRTLNMSSCNIENIYAGAFKGMQHLE
ILDLSKNLRLGFRMLENISYSLQFTRIKSLNFSKVYNTFGIGTQLKLRDICYLWNTTLNE
LVLNSNRIQLVQTNLLILVPRSLKTLRVEDNKFTFAPYQLQFACMVSLEEVYASDQYSAH
NPLLYGREPAENYTETMKDDSYCPYMQTEFLRNISKSTENCPYFENNHINVSYPHFPKSL
KKVELARSNYKYNITTFLVLPMNNMVEYLDFSDNIGYALTGPIGPFPKLKYLYLSRNYCS
HIGVKFFKFFKALEILQLDENFLGIVLSNEHYGPVIFEGLVNVKVLNLSSNIISYLPSTV
FTNMSSLETLDLSVNSIENWNIDVNTLNNLVHLNLSSNSFHALPTVLTNKLESNAKQKGE
KFTIDLRKNSFTTNCDEKEFLEWMVKHRDNMLHFRDYTFRNKTGATLSVEQFVEAVNKLD
KECRSYTAVIVFSSIGVSVFLSIVVGGIIYKNRWKLRYLMRITKIRQLGYNRLYNDPDED
LTYDAFISYANENLRFILDKIIPRMEEQEMKLCLHDRDFLPGNNIADNILEAIRNSRKTV
VILSNEFLKSKWCVYEFNMARMESIYSRGGENCLVVVMLEDVPTRNMTTEMLQWIKSNTY
IEYTTEEEGELLFWDNLMEALRE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaagattgattatttttcttttggtcgtacgaggtgttgtaatttcagttcca
tttttttgtggaccagatggaatatgtttgtgtgaggcttataatcagatggattgttcc
aaaacaaatttatcgatgtcaaaagtatgtggatttataagaaactcatctattttcaat
gtttcagtcttgcgtttggagctgaacgattatcaaatgataaaaaagtttgacttggaa
ggatgtgatgaactgaatgagttgtatcttggacaaaatgaaataagctctatagaaaac
ggttcgtttgccagatttgatcgtcttgagctacttgatattaacaacaactgtttggct
atatataatggaacagttcaacaaggctttaaatttcctctaacaacaaaggcacttaaa
ttgaatggaaattcgaaagcagatacaagtggacaagtatcatatccggatttatcttat
ttaagtaaccttgaagttttgtacatggatggtctgaaggacaaaatgtttccagagttc
tatcgcatgattaagacattacaaaagctagttctgtctggattgaacggaaactgtaat
atctctgtaattacaaactctacattgcaaaaccttcttcatgtgagaactttgaatatg
tcttcttgtaacatagaaaacatatatgccggggcttttaaaggcatgcaacatttagaa
atattagatttatctaagaatttacgtcttggatttcgcatgttggaaaatatttcatac
agcttacagtttactagaatcaaatcgttaaacttctctaaagtttataatacgtttggt
ataggaacacagttaaaacttcgtgatatttgttacctttggaatacaacattgaatgaa
cttgttttaaacagtaatcgaattcagttagttcaaacaaatttgttgatacttgttcca
agaagtttaaaaaccctccgcgtagaagacaataaatttacgtttgcaccttatcaacta
caatttgcctgtatggttagtttggaggaagtgtacgctagcgaccaatatagcgctcat
aatcctcttttgtacggaagggaacccgctgaaaactataccgaaactatgaaagacgat
tcttattgtccgtatatgcaaactgagttcttgcgaaatataagcaaaagcactgaaaac
tgtccttattttgaaaataaccatataaatgtgtcctacccacattttccaaaaagccta
aagaaagtggaacttgctcgtagtaattataaatataatattacaacatttctagttttg
ccaatgaataacatggttgaatatttggatttttctgacaatatcggttatgcattgaca
gggcctataggaccatttcccaaactgaaatatctgtatttatctcgaaattattgttca
catattggagttaagttttttaaattctttaaagctcttgaaattctccagctggacgaa
aatttccttggaatagttctttcaaatgaacactatggtcccgtgatatttgaagggtta
gtgaatgtcaaagttttgaacttgtcatcaaatattatatcgtacttaccatcaacagta
tttacaaacatgtcaagtctagaaacattagatttaagtgtgaacagcattgaaaattgg
aatattgatgtaaatacattgaacaatttggtacatttaaatctgagctctaattctttt
cacgcgctccctactgtactcacaaacaaactggaatcaaacgctaaacaaaaaggggaa
aagttcacaattgatcttagaaagaattcattcacaacaaactgtgacgaaaaggagttt
ttagagtggatggtcaaacatagagataatatgctccactttagagattacacattccga
aacaaaacaggcgcgactctttcagttgaacaatttgttgaagccgttaataaacttgat
aaagaatgtcgctcgtacacagctgtaattgttttcagttcaatcggcgtttcagtattt
ctttcaattgttgttggaggtatcatctacaagaaccgatggaaattaagatatttaatg
aggattactaaaatcagacaattaggctataacagactttataatgatcctgatgaagat
ttaacatatgatgcgttcatatcttatgcaaatgaaaacctacgtttcatactggacaag
attattccgcgtatggaggaacaggaaatgaagttgtgtttacacgatagggacttctta
cctggaaacaatattgcagacaatatccttgaagcgataagaaacagcagaaaaactgtt
gtaattctgtcgaatgaattcttgaaaagcaaatggtgcgtatatgagttcaatatggcg
aggatggaaagtatctattctcgagggggtgaaaattgtcttgtagttgttatgttagaa
gatgtcccaaccagaaatatgaccactgaaatgttgcaatggataaagtccaatacgtat
atagaatacacgacagaagaagaaggagaactacttttttgggataacctcatggaagcg
ttaagggaatga
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