Mercenaria mercenaria (northern quahog): 123564762
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Entry
123564762 CDS
T07835
Name
(RefSeq) short transient receptor potential channel 7-like isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
mmer
Mercenaria mercenaria (northern quahog)
Brite
KEGG Orthology (KO) [BR:
mmer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmer04040
]
123564762
Ion channels [BR:
mmer04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123564762
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_3
Ank
Imm30
DUF6212
PKD_channel
Motif
Other DBs
NCBI-GeneID:
123564762
NCBI-ProteinID:
XP_045214493
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All DBs
Position
2:complement(103252347..103346388)
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AA seq
1127 aa
AA seq
DB search
MMIMEDLEEWEKWGSEYGTTADHKRSSAMPSQGSLFTNFEDVQLTDEERVYLNAAYLGDL
GVLRQSVEDAAESSLNVNCLDYMGRSALHISIDSEKLDVIEVLLDNLSFNCIEESLLHAI
SKGATKIVKIITEHPNFMAGEDRLKRLGVGEAFFRTEEKSQFSPDITPLILAAHYNNHEI
IQMFLSRNHRIEKPHPISCTCNDCVTKQNYDSLKRSRSRLNAYRALASPAYMALSSPDPI
MTTFELRQEMMKLAEIEKEFKSEYLSLVEKCMNFACELMDLCRGTQEVEAVLSEGSDCSS
DNGKRDPLARLKMAIRYQEKKFVAHPNCQQHMTSIWYGSEMGFLQSFNWLRESVYAILFL
PAIPFLCAVYVIFPNSKLGSIMRCPVTKFFTHTTSHICFLILLAVATFRLSEGNVSIGST
KDMKDSHYSHLSEEEKIESLLKETLRPASTLLTHVQICIVFWILGLLWIECKQIYSSGGL
SYFTNYYNFMDYSVLSMYLASYVLRFFTEYVVSDADNFFQGTLRARALLRQGNHSHFNLL
LDEIKDSKNHPRNYFMEASRFKWKMDDPEIVSDVLFAIANVISFARTTYLMPAFEVLGPL
QISLGRMIGDITRFMVLFTLVLFSFMVGLHNLYWYYGTQRIKMKVNDHTVFVYAAEAFQG
LKQTFYSLFWSIFGQVSITDINVKHPGPGGVRQCMLLDSDRNKILCTDGPIKNGSRAVFS
AGQGPGAAMTENSTDIVEGVGLFLFGIYHVVIIIVLINMLIAMMSHSFEAIQGDCDVEWK
FARTKLWMNYMDDGSTLPVPFNMIPSPKSFCYLWKCARDLCIGNKNGKREYERKIRKTFI
KSTWQNNVNMNVLMKNHEMESNFKSSSASLQRRRETVCKTLELKPDDTSYSDIMQRLVKR
YLFKLERAKDETERCENISRFNRYNLKDSAANIQNIRTEEIELIDEDDVPPPVPDTPRRI
QFDRAYDTQQPIPEDQETSQNNFRNTRGSSMRKRKGGGRGQGRKISHGATQIATTLAIPQ
LDAIQRQQKLLDVRLQHLQASSKENNRIIDDVEFLRRVMTENQKAMFNIIHALGNMQSEI
VSLVKCLSPAASTPPPTANAHNVSNSVSKSSTSKKRMSAQDDEESRF
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgatgataatggaagacttagaagagtgggaaaaatggggtagcgaatacggtacgacg
gcggaccataaaaggtcatcagccatgccctcccaagggtcactctttacaaattttgag
gacgttcagctgaccgatgaggaacgtgtttacctaaatgccgcctaccttggtgatctg
ggtgtcctccggcagtccgtagaagatgctgcagaatcttctctcaatgtcaactgcctt
gactacatgggaaggagtgcgctccatatttccatcgacagtgaaaaactcgatgtgatt
gaagtccttctggacaacctaagttttaattgcatcgaggagtcacttcttcatgctata
agtaagggcgccacgaaaatcgtcaagattattactgagcatccaaactttatggctggc
gaggacagactaaagagactaggtgttggtgaggcattcttccggacagaagaaaagagt
cagttttctccagacattacccctcttatattagctgctcattataacaatcatgaaatc
atacaaatgttcctttcacgtaatcatagaatagaaaaacctcatccaatttcatgtaca
tgtaacgattgtgtgacaaaacagaattatgattcactcaaaaggtcaaggtctcgacta
aatgcctaccgggcacttgcaagtccagcatatatggctctatccagtccggatcccatc
atgacaacgttcgaattgaggcaagaaatgatgaaattagcagaaatagagaaagagttc
aagagcgaatacctcagtttagttgaaaagtgtatgaattttgcatgcgagttgatggac
ttgtgccgagggacacaggaggtagaggccgtgctcagtgaaggaagtgattgctcctcg
gacaatggcaagcgagatccactggcgagattaaaaatggccatcaggtaccaggagaag
aagtttgttgctcatccaaattgtcagcagcatatgacaagtatatggtacggttcagag
atgggattccttcagtcgtttaactggctcagagagagtgtatatgctatcctgtttcta
cctgcgatacccttcctctgtgcagtatatgttatttttccaaattccaagctcggttct
attatgcgatgccctgtgacaaaatttttcactcatactacttcacatatttgtttcctt
atattactggctgtggccacattccggctctccgagggtaatgtatccatagggtcaact
aaagacatgaaggattcgcattactcccatctttcagaggaggagaagatagaaagttta
ttaaaagaaactctcagacctgcaagcaccttattaacacatgtacaaatttgtattgta
ttttggatattaggcttattgtggatagagtgtaaacagatatacagctcagggggtctg
tcttacttcacaaactactataattttatggactacagtgtcttatccatgtatctagcg
tcttacgtgctcagattctttactgaatacgtcgtatcagacgctgacaatttttttcaa
ggcaccttgcgagcacgtgccctgttaaggcagggtaatcactctcatttcaacctactg
ctggatgaaatcaaagattccaaaaatcatccaagaaactatttcatggaagcatcgcgt
ttcaagtggaaaatggacgacccggagatagtttctgatgttttgtttgccattgctaat
gtgataagctttgcccgaactacctacctcatgccagcgttcgaggtgctgggacctcta
caaatatcgctgggcaggatgatcggtgatatcactagattcatggtgctcttcacactt
gtactgttttcgttcatggtaggtcttcacaatttatactggtattacggtacacagcgg
attaagatgaaagtgaacgatcatacagtgtttgtgtatgcagcggaagcattccaaggg
ttaaagcaaacgttttacagcttattttggtcaatatttggacaagttagcattacggat
atcaacgtcaagcatccaggaccaggcggagttcgtcagtgtatgcttctggacagtgac
cgtaacaaaatcctttgtacggacggaccaatcaaaaacgggtccagggcagtatttagt
gctgggcagggtccaggtgccgccatgacagaaaatagcaccgatattgttgaaggtgtc
ggtcttttcctgtttggaatctaccatgtcgttataataatcgtcctcattaatatgctg
atagctatgatgagtcattccttcgaagctattcaaggtgactgtgatgtggaatggaag
tttgcgaggacaaagttgtggatgaattacatggatgacgggagcacattgccagtacca
ttcaacatgattccctctccaaaatcattctgttacctgtggaagtgcgctcgagacctg
tgcataggcaacaagaatggcaagagagaatatgaaagaaaaataagaaaaacgtttata
aagagcacatggcaaaacaatgtcaacatgaatgttttaatgaaaaatcatgaaatggaa
tcaaatttcaagtcgagtagtgccagtctacagaggcgacgggaaacggtatgcaaaaca
ttagaactgaaaccggatgatacctcatattcggatattatgcagcgtctggttaagaga
tacctgttcaaactggagagagcgaaggatgaaactgaacgatgtgagaacatctccaga
tttaacagatataatttaaaagacagtgcagcaaatattcagaatatacggacggaagag
attgaactgattgatgaagacgatgttccaccgccagttcctgacactcctcgccgtata
cagtttgatcgggcatacgacacacaacagcccatacctgaagatcaggagacaagtcaa
aacaatttcagaaatactagagggtcgtccatgcgcaagcgcaaaggaggagggcgtggt
caagggagaaaaatttctcacggtgcaacccagattgcaacaactttagcaataccacaa
cttgacgctatacaaagacaacagaaactgctggatgtaagattacaacatcttcaggca
agcagtaaagaaaacaatagaattattgacgatgttgaattcctacggcgtgttatgact
gaaaatcagaaagccatgtttaacattatccatgcacttggcaatatgcagagcgagata
gtgtcgctggtaaagtgtctgtccccggcggcatcgactccaccgccaacagctaatgct
cataatgtatcgaattcggtctctaaatcaagtacatccaaaaagcgcatgagcgcacaa
gatgacgaggaaagtagattttaa
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