Mycobacterium marinum M: MMAR_1694
Help
Entry
MMAR_1694 CDS
T00694
Symbol
ligA
Name
(GenBank) DNA ligase [NAD dependent] LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mmi
Mycobacterium marinum M
Pathway
mmi03030
DNA replication
mmi03410
Base excision repair
mmi03420
Nucleotide excision repair
mmi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMAR_1694 (ligA)
03410 Base excision repair
MMAR_1694 (ligA)
03420 Nucleotide excision repair
MMAR_1694 (ligA)
03430 Mismatch repair
MMAR_1694 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmi03032
]
MMAR_1694 (ligA)
03400 DNA repair and recombination proteins [BR:
mmi03400
]
MMAR_1694 (ligA)
Enzymes [BR:
mmi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MMAR_1694 (ligA)
DNA replication proteins [BR:
mmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMAR_1694 (ligA)
DNA repair and recombination proteins [BR:
mmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MMAR_1694 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMAR_1694 (ligA)
MMR (mismatch excision repair)
DNA ligase
MMAR_1694 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MMAR_1694 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
Auto_anti-p27
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
ACC40144
UniProt:
B2HIF0
LinkDB
All DBs
Position
2041858..2043921
Genome browser
AA seq
687 aa
AA seq
DB search
MTPEVLRQWQELAEQVREHQFRYYVRDAPVITDAEFDELLRRLEALEEQYPELRTPDSPT
QLVGGAGFATEFEPVEHLERMLSLDNAFNTEELTAWAGRIHADVGDSAAYLCELKIDGVA
LSLVYEGGRLTRASTRGDGRTGEDVTLNARTIEDVPERLSHSEDHRMPEVLEVRGEVFFR
VADFQALNASLVEEGKAPFANPRNSAAGSLRQKDPAVTARRRLRMICHGLGHTEGFRPAT
LHQAYLALQAWGLPVSQHTTLVADLAGVQERIDYWGEHRHEVDHEIDGVVVKVDDVALQR
RLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAGSTVAQATL
HNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPECGTPLAPE
KEGDADIRCPNTRSCPGQLRERVFHVSSRNALDIEMLGYEAGAALLSARVIGDEGDLFGL
TEEELLRTDLFRTKAGDLSANGRRLLANLDKAKAAPLWRVLVALSIRHVGPTAARALATE
FGSIDAIVSATTEQLAAVEGVGPTIASAVSEWFTVDWHREIVEKWRAAGVRMADERDDSV
PRTLAGVTVVVTGSLPGFSRDEAKEAIVTRGGKAAGSVSKKTSYVVAGDAPGSKYDKAVE
LGVPILDEDGFRKLLEQGPPAEVGEPT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgactcctgaggtgttgcggcagtggcaggaactggccgagcaggtgcgtgaacaccag
tttcgctactacgtgcgcgacgcgccggtgatcaccgacgcggaattcgacgaattgctg
cgccggctggaggcgctcgaagaacagtatcccgagctacgcacacccgattcgcccact
cagctggtcggtggcgccggtttcgcgaccgagttcgaacccgtcgagcatctggaaaga
atgctcagcctcgacaacgcgttcaacaccgaggaactcaccgcctgggccggccgcatc
cacgccgatgtcggcgacagtgcggcctacttgtgtgagctcaagatcgacggcgtggcg
ctgtcgctggtgtacgaaggggggcggctgacccgggcctccacccggggcgacggccgc
accggcgaagatgtcacgctcaatgcccgcaccatcgaggacgttccggaacggctttcc
cacagcgaggaccaccgcatgcccgaggtgctcgaggtccgcggtgaggtgttctttcgg
gtggctgatttccaggcgctcaacgcgagcttggtcgaggagggcaaggcaccgttcgcc
aacccccgcaacagcgcggccgggtcgttgcggcaaaaggacccggcggtcacggcccgg
cgcagattgcggatgatctgccatgggctgggccacaccgaaggctttcgcccggcgacg
ctgcaccaggcctacctggcgttgcaggcctgggggctgccggtttcccagcacaccacg
ctggtcgccgacctggccggggtacaggagcgcatcgactactggggcgagcatcgccac
gaggtcgaccacgaaatcgacggcgtggtggtcaaagtcgacgatgtcgccctgcagcgg
cggctcggttccacctcacgggcaccgcgctgggcgatcgcgtacaagtacccgcccgag
gaagcccagaccaagctgctcgatattcgggtcaacgtcggccgaaccgggcgagttacg
ccgtttgcgttcatgacgccggtgaaggtcgcgggctcgacggtggcacaagccaccttg
cacaacgcgtcggaggtcaagcgcaagggcgtgctgatcggcgacacggtggtgatccgc
aaggccggtgacgtgatccccgaagtgttgggtccggtggtcgacctccgtgatgggtcc
gaacgcgaattcgtcatgcccacaacgtgtccggagtgcggcacgccgctggctccggag
aaggagggcgacgccgacatccgctgtccgaatacccgcagctgtccggggcagttgcgg
gagcgggtttttcatgtctccagccgcaatgccctcgacatcgagatgctgggctatgag
gctggcgccgcgctgctttcggcgcgggtgatcggcgatgaaggcgacctgttcgggctc
accgaggaagagctgcttcgcaccgacctgttccgcaccaaggccggtgacttgtccgcc
aacggccggcggctactggccaatctggacaaggcgaaggcggcgccactatggcgcgtg
ctggtggcgttgtccatccgccatgtcggaccgacagcggcacgcgcactggccaccgag
ttcggcagcatcgatgcgatcgtctccgcgaccaccgaacagttggccgccgttgaggga
gtgggaccgacgatcgcctccgccgtttcggagtggttcaccgtcgactggcaccgcgag
atcgtcgagaagtggcgggccgccggtgtgcggatggccgatgagcgcgacgacagtgtg
ccgcgcacactggccggggtaaccgtggtggtcaccggctcgttgcccggattctcacgg
gacgaggccaaggaggcgatcgtgacccgtggcggcaaagccgccggttcggtatcgaaa
aagacctcctacgtcgtcgccggtgacgcacccggctcgaagtacgacaaggcggtcgaa
ctcggcgtgcccatcctcgacgaagatgggtttcgaaagttgttggagcagggccccccg
gccgaagtgggggagccgacctag
DBGET
integrated database retrieval system
