Marmota marmota marmota (Alpine marmot): 107135761 Help Entry 107135761         CDS       T09644                                  Symbol Traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism mmma  Marmota marmota marmota (Alpine marmot) Pathway mmma04010   MAPK signaling pathway mmma04064   NF-kappa B signaling pathway mmma04120   Ubiquitin mediated proteolysis mmma04140   Autophagy - animal mmma04144   Endocytosis mmma04380   Osteoclast differentiation mmma04620   Toll-like receptor signaling pathway mmma04621   NOD-like receptor signaling pathway mmma04622   RIG-I-like receptor signaling pathway mmma04657   IL-17 signaling pathway mmma04722   Neurotrophin signaling pathway mmma04936   Alcoholic liver disease mmma05132   Salmonella infection mmma05133   Pertussis mmma05135   Yersinia infection mmma05140   Leishmaniasis mmma05142   Chagas disease mmma05145   Toxoplasmosis mmma05152   Tuberculosis mmma05160   Hepatitis C mmma05161   Hepatitis B mmma05162   Measles mmma05168   Herpes simplex virus 1 infection mmma05169   Epstein-Barr virus infection mmma05170   Human immunodeficiency virus 1 infection mmma05171   Coronavirus disease - COVID-19 mmma05200   Pathways in cancer mmma05222   Small cell lung cancer mmma05235   PD-L1 expression and PD-1 checkpoint pathway in cancer mmma05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:mmma00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     107135761 (Traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     107135761 (Traf6)    04064 NF-kappa B signaling pathway     107135761 (Traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     107135761 (Traf6)    04140 Autophagy - animal     107135761 (Traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     107135761 (Traf6)    04621 NOD-like receptor signaling pathway     107135761 (Traf6)    04622 RIG-I-like receptor signaling pathway     107135761 (Traf6)    04657 IL-17 signaling pathway     107135761 (Traf6)   09156 Nervous system    04722 Neurotrophin signaling pathway     107135761 (Traf6)   09158 Development and regeneration    04380 Osteoclast differentiation     107135761 (Traf6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     107135761 (Traf6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     107135761 (Traf6)   09162 Cancer: specific types    05222 Small cell lung cancer     107135761 (Traf6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     107135761 (Traf6)    05161 Hepatitis B     107135761 (Traf6)    05160 Hepatitis C     107135761 (Traf6)    05171 Coronavirus disease - COVID-19     107135761 (Traf6)    05162 Measles     107135761 (Traf6)    05168 Herpes simplex virus 1 infection     107135761 (Traf6)    05169 Epstein-Barr virus infection     107135761 (Traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     107135761 (Traf6)    05135 Yersinia infection     107135761 (Traf6)    05133 Pertussis     107135761 (Traf6)    05152 Tuberculosis     107135761 (Traf6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     107135761 (Traf6)    05140 Leishmaniasis     107135761 (Traf6)    05142 Chagas disease     107135761 (Traf6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     107135761 (Traf6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     107135761 (Traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mmma04131]     107135761 (Traf6)    04121 Ubiquitin system [BR:mmma04121]     107135761 (Traf6) Enzymes [BR:mmma01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      107135761 (Traf6) Membrane trafficking [BR:mmma04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     107135761 (Traf6) Ubiquitin system [BR:mmma04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     107135761 (Traf6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-TRAF_2 Sina_ZnF TRAF3_RING SlyX RING_XB3-XBAT31 zf-RING_11 U-box DUF4455 Spc29 UPF0242 Filament Myosin_tail_1 DUF16 DUF7310 TMF_DNA_bd ATG16 PspA_IM30 Motif Other DBs NCBI-GeneID:  107135761 NCBI-ProteinID:  XP_015333274 Ensembl:  ENSMMMG00000011285 UniProt:  A0A8C5ZBZ6 LinkDB All DBs Position Unknown AA seq 530 aa AA seqDB search MSLLNCENSCGSSQSESNCCAAMANSCSTAIKDDSVSGSASTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNEGCLHKMELRHLEDHQAHCEFALMNCPQCQRAFQKCQFNIHILK DCPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCSFSTFGCHEKMQRNHLARHLQENTQLHMRMLAQAVHSLNLAFDAASPSQMPSGYRPEI ENFQEIIQQLEGRLVRQDHQIRELTAKMETQSMYVSDLKRTIRTLEDKVAEIEAQQCNGI YIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQRCANYISLFVH TMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQRPTIARNPKGFG YVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt atgagtctgttaaattgtgaaaacagctgtggatccagccagtctgaaagtaactgttgt gctgccatggccaactcctgtagcactgcaatcaaagatgacagtgtaagtggaagtgcc agcacaggaaatctctccagctcctttatggaagagatccagggatatgacgtagagttt gacccacctctggaaagcaagtatgaatgccctatctgcctgatggccttacgggaagca gtgcaaacaccatgtggccataggttctgcaaagcctgcatcatcaaatccataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactctttcctgac aattttgcaaaacgagagattctttctcttacggtaaagtgtccaaatgaaggttgtttg cacaaaatggaactgaggcatctcgaggatcatcaagcacattgtgagtttgctcttatg aattgtccacaatgccagcgtgcattccaaaaatgccaatttaatattcacatccttaag gattgtccgaggagacaggtttcttgtgtaaactgtgctgtatccatggcatttgaagac aaagagatacatgaccagaactgtcctttggcaaatgtcatctgtgaatattgcaatacc atgctcatcagagaacagatgcctaatcattatgatctagactgtccaacggccccaatc ccatgttctttcagtactttcggttgccatgaaaagatgcaaaggaatcacttggctcgc cacctgcaagagaatacccagttacacatgagaatgttggcccaggctgttcatagttta aatcttgctttcgatgctgcctctccatcccagatgccttctgggtatcgcccagaaatt gaaaatttccaggaaatcattcaacagttagagggtcgccttgtaagacaggaccatcaa atccgggagctgactgctaaaatggaaactcagagtatgtatgtaagcgatctcaaacgg actattagaacccttgaagacaaagttgctgaaattgaagcacaacagtgcaatgggatt tatatttggaagattggtaactttgggatgcacttgaaatcgcaagaggaggagaaacct gtggtcattcatagtcctggattctacacaggcaaacctggatataaattgtgtatgcgc ctgcatcttcaattaccaactgctcagcggtgtgcaaactacatctcactctttgtccac acaatgcaaggagagtatgatagccacctaccttggcccttccaaggtacaatacgcctt acgattctggatcagtctgaagcacctataaggcaaaaccatgaagaaataatggatgcc aaaccagagctgcttgccttccagcggcccacaatcgccaggaacccgaaaggttttggc tatgtaacttttatgcacctggaagccctaagacagagaaccttcattaaggatgatacg ttattagtgcgttgtgaagtctctacccgctttgacatgggtgggcttcggaaggagggt tttcagccacgaagtacagatgcaggggtgtag

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