Marmota marmota marmota (Alpine marmot): 107137364
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Entry
107137364 CDS
T09644
Symbol
Ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
107137364 (Ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
107137364 (Ltbp1)
Domain-containing proteins not elsewhere classified [BR:
mmma04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
107137364 (Ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_TEN
Plasmod_Pvs28
EGF_2
Motif
Other DBs
NCBI-GeneID:
107137364
NCBI-ProteinID:
XP_015335265
Ensembl:
ENSMMMG00000018556
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MCLRPQLCVCKPGTKGKACETTVAQDTSSPVFGGQNPGVASSWVPPEQAVKHTASKKADP
LPRVSPVAQMTLTLKPKPSVGVSQQIHSQVTPLSSQNVMIHHGQSQEYVPKPKYFPAQKV
ISGEQSTDASFPLRYGQDHVASPFQLSNHTGRIKVVFTPSICKVTCTKGSCQNSCEKGNT
TTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGKLCQIPVHGASV
PKLFQHSQQPGKALGTHVIHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKHPPEASVQIHQ
VSRIDGPTGQKVKEVQQGQSQVSYQGLPVQKTQTVHSTYSHQQVIPHVYPVAAKTQLGRC
FQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKPSYHGYNQMMECLQGYKRV
NNTFCQDINECQLQGVCPNGECLNTMGSYRCTCKMGYGPDPTFSSCVPDPPVISEEKGPC
YRLVSSGRQCMHPLSVHLTKQLCCCSVGKAWGPHCEKCPLPGTAAFKEICPGGMGYTVSG
VHRRRPIHHHVGKGPVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTFSREHGPGVAEPEV
ATAPPEKEIPSLDQEKTKLEPGQPQLSPGISTIHLHPQFPVVIEKTSPPVPVEVAPEAST
SSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYEGYRFSEQQRKCVDIDEC
TQAQHLCSQGRCENTEGSFLCICPAGFMASEEGTNCIDVDECLRPDVCGEGHCINTVGAF
RCEYCDSGYRMTRRGRCEDIDECLTPSTCPDEQCVNSPGSYQCVPCTEGFRGWNGQCLDV
DECLEPNVCTNGSCSNLEGSYMCSCHKGYSPTPDHRHCQDIDECQQGNLCIHGQCKNTEG
SFRCTCGQGYQLSAAKDQCEDIDECQHHHLCTHGQCRNTEGSFQCVCDQGYRASALGDHC
EDINECLEDKSVCQGGDCINTQGSYDCACPEGFHLNDNKGCQDINECEQPGLCGPHGECL
NTDGSFHCACEQGFSISADGRTCEDIDECVNNTVCDSHGFCDNTAGSFRCLCYQGFQAPQ
DGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADENQEYSPMTGQCRSRASGDLDVDQ
PTEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVLGTAEFTEMC
PRGKGFVPAGESSYDIGGENYKDADECLLFGQEICKNGFCLNTQPGYECYCKQGTYYDPV
KLQCFDMDECQDPNSCIDGQCVNTEGSYNCFCTHPMVLDASEKRCIRPTESNEQIEETDV
YQDLCWEHLSEEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKDSDDYAQLCNIPV
TGRRQPYGRDALVDFSEQYAPEADPYFIQDRFLNSFEELQAEECGILNGCENGRCVRVQE
GYTCDCFDGYHLDMAKMTCVDVNECDELNNRMSLCKNAKCINTEGSYKCLCLPGYVPSDK
PNYCTPLNTALNLEKDSDLE
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctccggcctcaactctgtgtgtgtaaaccggggaccaagggcaaagcctgtgag
acgacagttgcccaggacacctcgtcaccagtctttggagggcagaatcctggggttgcc
tcctcttgggttcctcctgagcaagcagtaaagcacactgcatctaagaaggcagaccct
ctaccaagagtcagtcctgtggcccagatgaccttgaccctcaagccaaagccttcagta
ggagtctcccagcagatccattctcaagtgacgcccctttcctcacagaatgtgatgatt
catcatggccagtcccaggaatatgtgcccaagcccaagtattttccagctcagaaggtg
atttcgggagagcagtccacggatgcttcattcccattaagatatgggcaggaccacgtt
gcctcaccttttcagttgagtaaccacactggccgcatcaaggtggtctttactccgagc
atctgtaaagtgacctgcaccaagggcagctgtcagaacagctgcgagaaggggaacacc
accactctcattagtgagaatggccatgctgccgacaccctgacggccacgaacttccga
gtggtgatttgccatcttccgtgcatgaatggtggccagtgtagttcaagggacaaatgc
cagtgccctccaaatttcacaggaaagctttgtcagatcccggtccatggtgccagtgtg
ccgaaactttttcagcattcccagcagccaggaaaggcgttggggacccatgtcatccat
tcaacgcataccttgcctctgaccatgactagccagcaaggagtcaaagtgaaatttcct
cccaacatagttaatatccatgtgaaacatcctcctgaggcttctgtccagatccatcag
gtttcaagaattgatggcccaacaggccagaaggtaaaagaagttcagcagggccaatcc
caagtctcttaccaagggcttccggtccagaagacccagactgtgcattccacatactcc
caccagcaggtcattccgcatgtctatcctgtggctgctaaaacacagcttggccggtgc
ttccaggaaaccattgggtcacagtgtggcaaagctctccctggcctttcaaagcaagag
gactgctgtggaaccgtgggtacctcctggggctttaacaaatgccagaaatgtcccaag
aagccatcctatcatggatataatcaaatgatggaatgcctacaaggttataagcgggtt
aacaacaccttttgtcaagatattaatgaatgccagctacaaggtgtatgccctaatggt
gagtgtttgaataccatgggcagctaccgatgtacctgcaaaatgggatatgggccagac
cctaccttttcaagttgtgttccggatccccctgtgatctcagaagagaaggggccctgt
taccggcttgtcagttccggaaggcagtgtatgcaccctctgtctgttcacctcaccaag
cagctctgctgttgtagtgtgggcaaggcctggggcccacactgtgagaaatgtcccctt
ccaggcacagctgcttttaaggaaatctgtcctggtggaatgggttatacggtttctggc
gttcatagacgcaggccaatccatcaccatgtaggtaaaggacctgtatttgtcaagcca
aagaacactcaacctgttgctaaaagtactcatcctccacctctcccagccaaggaagag
ccagtggaggccctgactttctcccgggaacacgggccaggagtggcggagccggaagtg
gcaactgcaccccctgagaaggaaataccttcattggatcaagagaaaaccaaacttgag
cctggtcaaccccagctctccccaggcatttcaactattcatctgcatccacagtttcca
gtggtaattgagaaaacatcgcctcctgtgcctgtagaagtagctcctgaggcttctaca
tcaagtgcgagccaagtgattgcacctactcaagtaacagaaattaatgaatgtactgtg
aaccctgatatctgtggagcaggacactgcattaacttaccggtgcggtacacctgtatc
tgctacgagggctacaggttcagtgagcaacagaggaagtgtgttgatattgatgaatgt
actcaggcccaacacctctgctcccaaggacgctgtgaaaacaccgagggaagtttcttg
tgtatttgcccggcgggatttatggccagtgaggagggtactaactgcatagacgtggac
gagtgcctgaggcctgacgtctgtggggagggacactgcatcaacaccgtgggggccttc
cggtgtgaatactgtgatagcgggtaccgcatgacccggagaggccgttgcgaggatatt
gatgagtgtttgactccaagtacttgtccagatgagcagtgtgtgaattcccccgggtct
taccagtgtgtcccctgcacagaaggattcagaggctggaatggacagtgccttgatgtg
gacgagtgtctggagccaaacgtctgtacaaatggttcttgttccaacctcgagggctcc
tacatgtgctcctgccacaagggctacagccccacgcctgaccacagacactgtcaagat
attgatgaatgtcagcaagggaatctatgcatccacgggcagtgcaaaaacaccgagggt
tccttccgatgtacctgtggccaggggtaccagctgtcggctgctaaagaccagtgtgaa
gatattgatgaatgtcagcaccaccacctttgcactcacgggcagtgcaggaacacagag
ggctccttccagtgcgtgtgtgaccagggttacagagcatctgcacttggagaccactgt
gaagatatcaacgaatgtctggaggacaagagtgtgtgccaaggaggagactgcattaac
acccaagggtcctatgactgtgcttgcccagagggattccacctaaatgacaataaagga
tgtcaagatattaatgaatgtgaacagccagggctctgtgggcctcacggggagtgtcta
aacacagatggttctttccactgtgcctgtgagcagggcttctccatttctgcagacggc
cgcacatgtgaagatattgatgaatgtgtaaacaacactgtttgtgacagtcacgggttt
tgtgacaatacagctggctccttccgctgcctctgttatcagggctttcaagccccacag
gatgggcaagggtgtgtggatgtgaacgagtgtgaactcctcagtggcgtatgtggtgaa
gccttctgtgaaaacgtggaagggtccttcctgtgtgtgtgtgctgacgagaaccaggag
tacagccccatgactgggcagtgccgctcccgggcctctggagatttagatgtggaccag
cctacagaagaaaagaaagaatgctactataacctcaatgacgccagtctctgtgataat
gtgctggcccccaacgtcaccaaacaagaatgctgctgtacatcaggggctgggtgggga
gacaactgtgagatcttcccctgccccgtcctggggactgctgaattcacggaaatgtgt
cctagggggaaaggttttgtccccgctggagaatcctcttacgacattggtggtgagaac
tacaaagatgctgatgaatgcctactttttggacaggagatctgtaaaaatggtttctgt
ttgaacactcagcctggttatgaatgctactgtaagcaagggacatactatgatcctgtc
aaattgcagtgctttgatatggatgaatgtcaagatcccaacagttgtattgatggccag
tgtgttaacacagaaggctcttataactgcttttgtacccatccaatggtcctggatgct
tcagaaaaaagatgtatccgaccaacagaatcaaatgaacaaatagaagaaaccgatgtc
taccaagatctgtgctgggaacatctgagcgaagagtatgtgtgtagccgtcctcttgta
gggaagcagacaacatacaccgagtgctgctgtctgtatggagaggcctggggaatgcag
tgtgcgctctgccccatgaaggattcagatgactacgcccagctgtgtaacatccctgtg
acgggtcgccggcagccgtatggacgggacgccttggtcgactttagtgaacagtatgct
ccagaagccgatccctacttcatccaggaccgttttttaaatagcttcgaggagttacag
gctgaggaatgtggcatcctcaatggatgtgagaacggccgctgtgtgagggtccaggaa
ggttacacgtgtgattgctttgatgggtaccacttggatatggccaagatgacctgtgtt
gatgtaaatgaatgcgacgagttgaacaacaggatgtctctctgcaagaatgccaagtgc
attaacacagaaggttcctacaaatgtttgtgtctgccaggctacgtcccttctgacaag
cccaactactgcactccgttgaatacagccttgaatttagaaaaagacagtgacctggag
taa
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integrated database retrieval system
