Marmota marmota marmota (Alpine marmot): 107138240 Help Entry 107138240         CDS       T09644                                  Symbol Thbs1 Name (RefSeq) thrombospondin-1 isoform X1   KO K16857   thrombospondin 1 Organism mmma  Marmota marmota marmota (Alpine marmot) Pathway mmma04015   Rap1 signaling pathway mmma04115   p53 signaling pathway mmma04145   Phagosome mmma04148   Efferocytosis mmma04151   PI3K-Akt signaling pathway mmma04350   TGF-beta signaling pathway mmma04510   Focal adhesion mmma04512   ECM-receptor interaction mmma04820   Cytoskeleton in muscle cells mmma05144   Malaria mmma05165   Human papillomavirus infection mmma05205   Proteoglycans in cancer mmma05206   MicroRNAs in cancer mmma05219   Bladder cancer Brite KEGG Orthology (KO) [BR:mmma00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     107138240 (Thbs1)    04350 TGF-beta signaling pathway     107138240 (Thbs1)    04151 PI3K-Akt signaling pathway     107138240 (Thbs1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     107138240 (Thbs1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     107138240 (Thbs1)    04148 Efferocytosis     107138240 (Thbs1)   09143 Cell growth and death    04115 p53 signaling pathway     107138240 (Thbs1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     107138240 (Thbs1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     107138240 (Thbs1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     107138240 (Thbs1)    05205 Proteoglycans in cancer     107138240 (Thbs1)   09162 Cancer: specific types    05219 Bladder cancer     107138240 (Thbs1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     107138240 (Thbs1)   09174 Infectious disease: parasitic    05144 Malaria     107138240 (Thbs1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:mmma04131]     107138240 (Thbs1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mmma00536]     107138240 (Thbs1) Membrane trafficking [BR:mmma04131]  Endocytosis   Phagocytosis    Opsonins     107138240 (Thbs1) Glycosaminoglycan binding proteins [BR:mmma00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    107138240 (Thbs1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF Laminin_G_3 TSP1_ADAMTS Laminin_G_2 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  107138240 NCBI-ProteinID:  XP_015336329 Ensembl:  ENSMMMG00000021286 UniProt:  A0A8C6EYE8 LinkDB All DBs Position Unknown AA seq 1171 aa AA seqDB search MGLAWGFIVLFLLHVCDTNRIPESGGDNSVFDIFELTGAARRGSGRRLVKGPDPSSPAFR IENANLIPPVPDDKFQDLVDAVRADKGFLLLASLRQMKKTRGTLLAVERKDHSGQIFSVV SNGKAGTLDLSLSVQGNQQIVSVEEALLATGQWKTITLFVQEDRAQLYIDCEKMENAELD VPIQNIFTRDLANIARLRIAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSAATNVL LTLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIH KVTEENKVLANELRKPALCYHNGIQYRNNEEWTVDSCTECHCQNSVTICKKVSCPIMPCS NATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQ TRTCHIQECDKRFKQDGSWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEAR ETKACRKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPMPQFGGKDCIGDVTENQ VCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPPGYSGNGIQCKDVDECKEVPDAC FSHNGEHRCKNTDPGYNCLPCPPRFTGSQPFGRGVEHAMANKQVCKPRNPCTDGTHDCNK NAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCP NLPNSGQEDYDKDGVGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPY NHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLE HNPDQLDSDSDHIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDD NDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDVDDICPENVDISETDFRR FQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDKFNAVDFSGTFFINTERD DDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNA LWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVIMYEGKKIMADSGPIY DKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggattcattgttctgttcctgttgcacgtgtgtgacaccaaccga attccagagtctgggggagacaacagtgtttttgacatctttgaactcactggagctgcc cgcaggggttctgggcgccggctggtgaaggggcctgacccatccagcccagctttccgc attgagaatgccaacctgatcccccctgtgcctgatgacaagttccaagacctagtggat gctgtgcgggcagacaaaggtttcctcctcctggcttccctgaggcagatgaagaagacc cggggcacactgctggctgtggaacgtaaagaccactctggccagatcttcagtgtggtc tccaatggcaaagcaggcaccctggacctgagcctgagtgttcaggggaatcaacagata gtgtctgtggaagaagctcttctggccactggccagtggaaaaccatcaccctatttgtg caggaagacagggcccagctgtacatcgactgtgagaagatggagaatgctgaactggat gtccccatccaaaacatatttaccagggacctggccaatatcgccaggctccgcattgca aagggagatgtcaatgacaattttcagggggtgctgcagaatgtgaggtttgtctttgga accacaccagaagacatcctcaggaacaaagggtgctccagtgcagctacaaatgtcctc ctcactcttgacaacaatgtggtgaatggttccagccctgccatccgcaccaactacatt ggccacaagacaaaggacctgcaagctatttgtggcatctcctgtgatgagctgtccagc atggtcctggaactcaggggcctgcgcaccatcgtgaccacattgcaggacagcatccac aaagtgacggaagagaacaaagtgctggccaatgaactgaggaagcctgcactctgctat cacaatgggattcagtataggaataatgaggaatggactgtggatagctgcactgagtgt cactgtcagaactcagtcaccatctgcaaaaaggtgtcctgtcccattatgccctgctca aatgccactgttcctgatggagaatgctgcccacggtgttggcccagcgactctgcagat gatggctggtctccatggtcagagtggacttcctgctctgcaacgtgtggcaatggaatt cagcaacgcggtcgctcctgtgacagcctcaacaaccgatgtgagggctcctcagtccag acacggacctgccacattcaggagtgtgacaagagatttaaacaggatggcagctggagc cactggtccccgtggtcatcttgttctgtgacatgtggtgatggtgtgatcacaaggatt cggctctgcaactctcccagcccccagatgaatgggaaaccatgtgaaggcgaagcccgg gagaccaaagcttgcaggaaagacgcctgccccatcaatggaggctggggtccctggtca ccgtgggacatctgttctgtcacctgtggaggaggggtgcaaaaacgtagccggctctgc aacaaccccatgccccagtttggaggcaaagactgcattggtgatgtgacagaaaaccaa gtctgcaacaagcaggactgtccaattgatgggtgcctatccaatccctgctttgctggt gccaagtgtactagctatcctgatggcagctggaaatgtggtgcttgtcctcctggttac agtggaaatggcatccagtgcaaagatgttgatgagtgcaaagaagtgcctgatgcctgc ttcagccacaatggggagcacagatgtaagaacacagaccctggctataactgcttgccc tgccctccacgcttcactggctcacagccctttgggcgaggtgttgagcatgccatggcc aacaaacaggtatgcaagccccgaaacccctgcacagatgggacacatgactgcaacaag aatgccaagtgcaattacctgggccactacagtgaccccatgtaccgctgtgagtgcaaa cctggatatgctggcaatggcatcatctgcggggaggacacagacctggatggctggcca aacgaggacttggtgtgtgtggccaatgcaacgtaccactgcaaaaaggacaactgcccc aaccttcccaactcagggcaggaagactatgacaaggatggagttggtgatgcctgtgat gatgatgacgacaatgacaaaattccagatgacagggacaactgtccattccattacaac cctgcccagtatgactatgacagagatgatgtgggagaccgctgtgacaactgcccctac aaccataacccagaccaggcagacacagacaacaatggtgaaggagatgcctgcgctgca gacattgatggagatggtatcctcaatgaacgagacaactgccaatatgtctacaatgtg gaccagaaggacactgatatggatggagttggagatcagtgtgacaactgccccctggaa cacaatccagatcagctggactctgactctgaccacattggagacacctgtgacaacaat caggatattgatgaagatggccaccagaataatctagataactgtccctacgtgcccaat gctaaccaggctgaccatgataaggatggcaagggagatgcttgtgaccatgatgatgac aatgatggcattcctgatgacagggacaactgcaggctggtgcccaatcctgaccagaag gactctgatggtgatggtcgaggtgatgcttgcaaagatgactttgaccatgacaatgtg ccagacgttgatgacatctgtcctgagaatgttgacatcagtgagaccgattttcgccga ttccagatgattcctctagatcccaaagggacatcccaaaatgaccctaactgggttgtc cgccatcagggtaaagagctcgtacagactgtcaactgtgatcctggacttgctgtaggt tttgataagtttaatgccgtggatttcagtggcaccttcttcatcaacactgaaagggat gatgactacgctggatttgtgtttggctaccagtccagcagccgcttctatgttgttatg tggaagcaagtcacccagtcctactgggacaccaaccctacaagggctcagggatactca ggcctttcagtaaaagttgtgaactctaccacagggcctggcgagcacctacgaaatgcc ctgtggcacacaggaaacacccctggccaggtgcgcaccctgtggcatgaccctcgtcac ataggctggaaagatttcactgcctacagatggcgtctcagccacaggccaaagacaggt ttcattagagtgataatgtatgaagggaagaaaatcatggctgactcaggacccatctat gacaaaacctatgctggtggtcggctaggattgtttgtcttctctcaagaaatggtgttc ttctctgacctgaaatatgaatgtagagattcctaa

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