Marmota marmota marmota (Alpine marmot): 107139684
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Entry
107139684 CDS
T09644
Symbol
Apaf1
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma01524
Platinum drug resistance
mmma04115
p53 signaling pathway
mmma04210
Apoptosis
mmma04215
Apoptosis - multiple species
mmma05010
Alzheimer disease
mmma05012
Parkinson disease
mmma05014
Amyotrophic lateral sclerosis
mmma05016
Huntington disease
mmma05020
Prion disease
mmma05022
Pathways of neurodegeneration - multiple diseases
mmma05134
Legionellosis
mmma05152
Tuberculosis
mmma05160
Hepatitis C
mmma05161
Hepatitis B
mmma05162
Measles
mmma05164
Influenza A
mmma05168
Herpes simplex virus 1 infection
mmma05169
Epstein-Barr virus infection
mmma05200
Pathways in cancer
mmma05222
Small cell lung cancer
mmma05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
107139684 (Apaf1)
04215 Apoptosis - multiple species
107139684 (Apaf1)
04115 p53 signaling pathway
107139684 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107139684 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
107139684 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
107139684 (Apaf1)
05160 Hepatitis C
107139684 (Apaf1)
05164 Influenza A
107139684 (Apaf1)
05162 Measles
107139684 (Apaf1)
05168 Herpes simplex virus 1 infection
107139684 (Apaf1)
05169 Epstein-Barr virus infection
107139684 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
107139684 (Apaf1)
05152 Tuberculosis
107139684 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
107139684 (Apaf1)
05012 Parkinson disease
107139684 (Apaf1)
05014 Amyotrophic lateral sclerosis
107139684 (Apaf1)
05016 Huntington disease
107139684 (Apaf1)
05020 Prion disease
107139684 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
107139684 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
107139684 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
107139684 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NB-ARC
APAF1_C
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
APAF-1-like_WHD
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
CARD
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
eIF2A
Beta-prop_HPS5
WD40_like
Beta-prop_IFT140_1st
Beta-prop_SCAP
CARD_2
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
PEP5_VPS11_N
AAA_16
AAA_22
Utp8_b_propeller
NPHP3_N
AAA_18
NACHT
ATPase_2
Motif
Other DBs
NCBI-GeneID:
107139684
NCBI-ProteinID:
XP_048664062
Ensembl:
ENSMMMG00000019774
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGVLTVSEEEKVKNQPTQHQRAAMLIKLI
LKKDSYSYISFYNALLHEGYKDLAALLHSGIPVLSSSSGKDSNGGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLFKLNGDPGWVTIYGMAGCGKSVLAAEAVRDHSLLEGCFPG
GVHWVSVGKQDKSGLLIKLQNLCTRLDQDESFPQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDSWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVIPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFRYYLHDLQIDFLTEKNRSQLQDLHKKMITQFQRYHQLHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDNGMLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSTDDRFIATCSVDKKVKVGNYFPLELKXLWDLNEKECRNTMFGHTNSVNHCRFSP
DDELLASCSADGTLKLWDVRSANERKSINVKQFFLNSEDPQDEIEVIVKCCSWSADGARI
MVAAKNKIFLFDIYTSGLLAEIHTGHHSTIQYCDFSPQNHLAVVALSQYCVELWNVDSCV
KVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRVWETKKVCKNSAIVLKQEVDVVFQEN
DVMVLAVDNMKHLQLINGKTGQVDYLTEAKVSCCCLSPHLQYVAFGDEDGAIEILELLNN
RVFQSRVGHKKAVRHIQFTADEKTLISSSDDSSIQIWNWQSEEYVLLQGHQEAVKDFRLL
KHSGLLSWSFDGTVKVWNTITGKMEKDFVCHQGTVLSCDISSDATKFSSTSADKTAKIWS
FELPSPLHELKGHNGCVRCSAFSVDSSLLATGDDNGEIRIWNVSNGELLHLCAPVSVEEG
AATHGGWVTDLCFSPDSKMLVSAGGYLKWWNVETGESLQTFYTNGTNLKKIHVSSDFKTY
VTVDNLGILYILQILE
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtctacttcaacatagagaagctctggaaaaggacatt
aaaacatcctacatcatggatcacatgattagtgatggagttttaacagtgtcagaagag
gaaaaagtaaaaaatcagcccacacaacatcaacgagcagctatgctaattaaattgata
cttaaaaaagacagttattcctatatatcattctacaatgctctgctacatgaaggatat
aaagatcttgctgcccttcttcatagtggcattcctgtgctttcatcttccagtggcaaa
gattcaaatggtggaataacttcatatgtaaggacagtgctgtgtgaaggtggagtacca
caaaggccagttgtttttgttactagaaagaagctggtgaatgcaattcaacagaaactc
ttcaaattgaatggcgacccaggatgggtcaccatatatggaatggcaggctgtgggaag
tctgtattagctgcagaagctgttcgagatcattcactcttagaaggttgtttcccaggg
ggtgttcattgggtttcagttggaaaacaagacaaatctgggcttctgataaaactacag
aatctttgcacacggttggatcaggatgagagtttcccccagaggcttccacttaacatt
gaagaggcaaaagaccgtctccgcattctaatgctgcgcaaacacccaaggtctctgttg
atcttggatgacatttgggattcttgggttttaaaagcttttgacaatcagtgtcagatt
cttcttacaaccagagacaagagtgttacagattcagtaatgggtcctaaatatgtaatc
cctgtggagagtggcctcggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaaaaaagcagatttgccagaacaagctcatagtattataaaagaatgcaaaggttct
cctcttgtggtatctttaattggtgcacttttacgtgattttcccaaccggtgggaatac
tacctcaggcaactacagaacaagcagtttaagagaataaggaaatcttcatcttatgat
tatgaggctctggatgaagccatgtctataagtgttgaaatgctcagagaagacattaaa
gattattacacagatctttctatccttcagaaggatgttaaggtgcctacaaaggtatta
tgtattctctgggacatggaaactgaagaagttgaagacatattgcaggagtttgttaat
aagtctctcctattctgtgatcggaatggaaagtcgtttcgttattatttacatgatctt
caaatagattttcttacagagaagaatcgcagccaacttcaggatctacataagaagatg
atcactcagtttcagaggtatcaccagctgcatactctttccccagatcaggaggactgc
atgtattggtacaactttctggcttatcacatggctagtgccaatatgcacaaagaactt
tgtgctttaatgttttccctggactggattaaagccaaaacagaacttgtaggccctgct
catctgattcatgaatttgtggaatataggcatatattggatgaaaaggattgtgcagtc
tgtgagaattttcaagagtttttatctttaaatggacaccttcttggacgacagccattt
cctaatattgtacaactgggtctctgtgaaccagaaacttcagaagtttatcagcaagca
aagctgcaggccaagcaggaggtcgataacgggatgctttacctggagtggataaacaaa
aaaaccatcaagaatctctcccgcttagttgtccgcccccatacagatgctgtttaccat
gcatgcttttctgaggatggtcagagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaaacttctagaaatcaaagctcatgaggatgaagtg
ctttgttgtgcattctctacagatgacagatttatagcaacctgctcagtggataaaaaa
gtgaaggtaggaaactattttcctcttgaattgaaatagctttgggatttgaatgaaaaa
gaatgtcgaaataccatgtttggccatacaaattcagtcaatcactgtagattttcacca
gatgatgagcttttggccagttgttcagctgatggaacattaaagctttgggatgtgaga
tcagcaaacgagaggaaaagcattaatgtgaagcagttcttcctaaattcagaggaccct
caagacgagatagaagtgatagtgaaatgttgttcctggtctgctgatggtgctagaata
atggtggcagcaaaaaataaaatctttctttttgatatttataccagtggcctgttggca
gaaatccacacaggccatcatagcaccatccagtactgtgacttctcccctcaaaaccat
ttggcagtggtggctttgtcccaatactgtgtggagttatggaatgtagactcatgtgta
aaggtagctgattgcagaggacatttaagttgggttcatggtgtgatgttttctcctgat
ggatcatcatttttgacatcttctgacgaccaaacaatcagggtctgggagacaaagaag
gtatgtaagaactctgctatagtgttaaagcaagaagtagatgttgtgtttcaagaaaat
gacgtgatggtccttgcagttgacaatatgaaacatctgcaactcattaatggaaaaaca
ggtcaagttgattacctgactgaagctaaagttagctgctgttgcttaagcccacatctt
cagtatgtggcgtttggagatgaagatggtgccattgagattttagaacttctaaacaac
agagtcttccagtccagggttggtcacaagaaagctgtacggcacatccagttcacagct
gatgagaagactctcatttcaagttcagatgattcttcaattcagatatggaattggcag
tcagaggaatatgttcttctgcaaggccaccaggaagcagtgaaagacttcaggcttcta
aaacattcaggattgctttcttggtcatttgatggaacagtgaaggtatggaatactatt
actggaaaaatggaaaaagactttgtctgtcaccagggtacagtactttcttgtgatatt
tcttctgatgctaccaagttttcatctacctctgctgataagactgcaaagatctggagc
tttgaactcccttctcctctacacgagttgaaaggccacaatggctgtgtacgctgctcg
gccttctctgtggacagttccctgctggcaactggagatgacaatggagaaatcaggata
tggaatgtctcaaatggcgagcttcttcacttgtgtgctccagtttcagtagaagaagga
gctgctacccatggaggctgggtgacggacctttgtttttctccagatagcaaaatgctt
gtctctgctggaggatatcttaagtggtggaatgtcgagacgggggaatccttacagacc
ttctacacaaatggaactaatcttaagaaaatacatgtgtcctctgacttcaaaacttat
gtgactgttgacaatcttggtattttatatattttacagattttagagtaa
DBGET
integrated database retrieval system
