Marmota marmota marmota (Alpine marmot): 107139948
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Entry
107139948 CDS
T09644
Symbol
Tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X2
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107139948 (Tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107139948 (Tdg)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107139948 (Tdg)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107139948 (Tdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
107139948
NCBI-ProteinID:
XP_015338319
Ensembl:
ENSMMMG00000017385
LinkDB
All DBs
Position
Unknown
AA seq
410 aa
AA seq
DB search
MEAQNAGSYSLEQAQAFYSFPFQQMMTEAPDMAVMKEQQMPGEVPAQEPAQEPVQEAPKG
RKRKARTTEPKKPEEPKKPAESKKSGKSPKSKEKQEKITDAFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYAEHLGNSEPCNFSE
DRLTDSAELRGESAFSDIPNGQWMTQSFTDQIPSFNNHCGTLEQGEGNPA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcaaaacgcgggcagctattcccttgagcaagctcaagcattttattcattt
ccatttcaacaaatgatgactgaagctcctgatatggcagtcatgaaggaacagcagatg
ccaggcgaagttccagcccaagagcctgctcaggaaccagtacaagaggctccaaaagga
aggaaaagaaaagccagaacaactgaaccaaaaaaaccggaggaacccaaaaaacctgct
gagtccaagaagtctggcaagtccccaaaatcaaaagaaaagcaagaaaagattacagat
gcgtttaaagtaaaaagaaaagtggaccgttttaatggggtttccgaagctgaacttttg
accaagactctccctgatattttgaccttcaatctggacattgtgattattggcatcaac
ccaggactaatggctgcttacaaagggcatcattatcctggacctgggaaccatttttgg
aagtgtctgtttatgtcagggctgagtgaggtacagctcaatcacatggatgatcacact
ttaccagggaagtatggtattggatttaccaacatggtagaacggacgacaccaggcagc
aaggatctttccagtaaagaatttcgtgaaggaggacgtattctagtacagaaattacag
aaatatcagccacgaatagcggtgtttaatggaaaatgtatttatgaaatttttagtaaa
gaagtttttggagtaaaggttaagaacttggaatttgggcttcaaccccataagatccca
gatacagaaactctctgctatgttatgccatcgtccagtgcaaggtgtgctcagtttcct
cgagcccaggacaaagtccattactatattaagctgaaggacttaagagaccagttgaaa
ggcattgaacggaacacagacgttcaggaggtgcagtacacttttgacctacagcttgcc
caagaggatgcaaagaagatggcagttaaggaagaaaaatatgacccaggctatgaagca
gcgtatggaggtgcttacgctgagcatctgggcaacagtgagccatgcaacttctctgag
gacaggctaactgacagtgcggagttaagaggagaatcagctttcagtgacattccaaat
gggcagtggatgacccagtcgtttacagaccagattccttcctttaataatcactgtgga
acgctggagcagggggaagggaaccctgcttaa
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