Marmota marmota marmota (Alpine marmot): 107140911
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Entry
107140911 CDS
T09644
Symbol
Lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107140911 (Lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107140911 (Lig4)
Enzymes [BR:
mmma01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107140911 (Lig4)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107140911 (Lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107140911
NCBI-ProteinID:
XP_015339575
Ensembl:
ENSMMMG00000020199
UniProt:
A0A8C6A278
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASQTPQTVASHVPFADLCSTLERIQKSKGRVEKIRHFKEFLDSWRKFHDALHKNQKNV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
EAGDFAMIAYFVLKPRCLQKGSLTIQQVNELLDSIASNNSAKRKDLVKKSLLQLITQSSA
LEQKWLIRMIVKDLKLGVSQQTIFSVFHSDAVELHNVTTDLEKVCTQLHDPSVGLTDISI
TLFSAFKPMLAAIANIEHIEKDMRHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYTE
QFGASPQEGSLTPFIHNAFQPNVQTCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGREILRKRYEILGSTFTPIPGRVEIVQKAQAHTKNEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDILIVGGYWGKGLRGGMM
SHFLCAVAEKPPPGKKPSVFHTLCRVGSGYTMKELYDLGLKLANYWKAFHRKAPPGSILC
GTEKPEVYIEPCNSVIVQVKAAEIVPSDMYRTGCTLRFPRIEKIRDDKEWHECMTLEDLE
QLRGKASGKLASKHFCPGGDDEPQEKKRRAPPKVKKAIGIIEHLKAPNLSNVSKVSNIFE
DVEFCVMSGTDSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIIASDTHDV
VKPAWLLECFETKSCVPWQPRFMIHMCPSTKQHFAREYDHYGDSYFVDTDLNLLKEVFSG
IKNSNEQTPEEMASVIADLEYRYSWDCSPLSMFRHHTIYVDMYTVINDSSTRIEGTRLAI
SALELRFHGAKVAAHLAEGVSHVIVGEDHSRVSDFKAFRRTLKKKFKILQERWVIDSVDK
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaactccacagactgttgcatctcatgttccctttgcagatttatgt
tcaactttagagcgaatacagaaaagtaaaggacgtgtagaaaaaatcagacacttcaag
gaatttttagattcttggagaaaatttcatgatgcacttcataagaaccaaaaaaatgtt
acagattctttttatccggccatgagacttattcttcctcagctagaacgagagagaatg
gcttatggaatcaaagaaactatgctggccaagctttatattgaattgcttaatttgcca
agggaagggaaagatgccctaaagctcctcaattacaggacccccactgggacgcgtgga
gaggctggggactttgcaatgattgcctactttgtgctgaagccccgatgtttgcaaaaa
ggaagtttaaccatacagcaagtaaatgaacttttagattccattgccagcaataattct
gccaaaagaaaagacttggtgaaaaagagtcttcttcagcttataactcagagttcagca
ctggaacaaaagtggctcatacgaatgattgtgaaggacttaaagcttggtgttagtcag
caaactatattttctgtttttcacagtgatgctgtcgagttgcataatgttaccacagat
ctggaaaaagtctgtacacagctgcatgatccctctgtaggactcactgacatttccatc
actttgttttctgccttcaaaccaatgctagctgcaatagcaaacattgagcacatagag
aaggacatgagacaccagagtttctacatcgaaaccaaacttgatggtgagcggatgcag
atgcacaaagatggcgacgtttatcagtacttttcccgaaatggctataactacactgaa
cagtttggtgcctctccgcaagagggttctctcaccccattcattcataatgcattccag
ccaaatgtgcaaacctgtatccttgatggagagatgatggcctacaacccaaacacccag
acttttatgcaaaagggcaataagtttgatattaaaaggatggtggaagattctgatctg
cagacttgttattgtgtttttgacgtgttgatggttaataataaaaagctaggacgtgag
atcctgagaaaaaggtatgagatccttggcagtacctttacaccaataccaggtcgggtg
gagatagtgcagaaagcacaagctcataccaagaatgaagtcatcgatgcattgaatgaa
gcaatagataagagagaggagggaatcatgataaaacatcccttgtccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaagcctgagtatgtcactggactaatggat
gaattggatatcttaattgtgggaggctattggggtaaaggtttgcggggtggaatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtaagaagccgtctgtgttt
catactctctgtcgtgttggctcaggatacaccatgaaagaactgtatgatctaggtttg
aaattggccaactactggaaagcttttcatagaaaagctccaccaggcagcattttgtgt
ggaacagagaagccagaagtgtacatcgagccttgcaattctgtcatcgttcaggttaag
gctgcagagattgtccccagtgatatgtacagaactggctgcacgttgcgttttccgcgg
attgagaagatcagggatgacaaggagtggcatgagtgcatgaccctggaggacttggaa
cagctgcgggggaaggcctctggaaagctggcttcaaagcacttttgcccaggtggagat
gatgaaccacaagagaaaaagcggagagctcccccaaaggtgaagaaggctattggaatt
attgaacacctaaaggcacctaacctttctaacgttagcaaagtttccaatatatttgaa
gatgtcgagttttgtgttatgagtggaacagacagccatccaaagcctgacttggagaac
agaattgcagagttcggtggctatattgtacagaatccaggcccagacacatactgtgta
attgcaggttctgagaacatcagagtgaaaaacattattgcttctgatacacatgatgtt
gtcaagcctgcgtggcttttagaatgttttgagaccaaaagctgtgttccatggcagcct
cgctttatgattcacatgtgcccatcaacaaaacagcattttgcccgtgaatatgatcac
tatggtgatagttattttgttgatacagatttgaacctactgaaagaagtgttctcagga
attaaaaattctaatgaacagactcctgaagaaatggcctctgtgattgctgatttggag
tatcgatactcttgggactgctctcctctcagtatgtttcgacaccacaccatttatgtg
gacatgtacactgttattaatgactcgagtaccagaatcgagggaacgagattagccatc
agcgccttggagctccggttccatggggcaaaggtggctgctcacttagctgagggagtg
tcccatgtaattgttggggaggatcacagtcgtgtttcggattttaaagcttttagaaga
actcttaagaagaagtttaagatccttcaagaacgctgggtaattgactcggtagacaag
tgtgagttacaggaagaaaatcagtatttgatataa
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