KEGG   Marmota marmota marmota (Alpine marmot): 107142621
Entry
107142621         CDS       T09644                                 
Name
(RefSeq) LOW QUALITY PROTEIN: small nuclear ribonucleoprotein-associated protein B-like
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03040  Spliceosome
mmma05322  Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107142621
 09160 Human Diseases
  09163 Immune disease
   05322 Systemic lupus erythematosus
    107142621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mmma03019]
    107142621
   03041 Spliceosome [BR:mmma03041]
    107142621
   03032 DNA replication proteins [BR:mmma03032]
    107142621
Messenger RNA biogenesis [BR:mmma03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     107142621
Spliceosome [BR:mmma03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107142621
  U2 snRNP components
    107142621
 Complex B
  U1 snRNP components
    107142621
  U4/U6.U5 tri-snRNP components
    107142621
 Complex C
  U2 snRNP components
    107142621
DNA replication proteins [BR:mmma03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107142621
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107142621
NCBI-ProteinID: XP_048647789
Ensembl: ENSMMMG00000010199
LinkDB
Position
Unknown
AA seq 232 aa
MTVGKSSKMLQHIDYRMRCILQDGWIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQAE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARGPLAGAAGGPGIGRAAGRGIPAGVPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAATAAATASIAGAPTQYPPGRGGPPPPCM
GRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGLL
NT seq 699 nt   +upstreamnt  +downstreamnt
atgactgtgggcaagagcagcaagatgctgcagcacatcgactacaggatgagatgcatc
ctgcaagatggctggatcttcattggcaccttcaaggctttcgacaagcatatgaatttg
atcctctgtgattgtgatgagttcagaaagatcaagccaaagaactccaaacaagcagaa
agggaagagaagcgagtccttggtctggtgctgcttcgaggggagaacctggtctcgatg
acagtagaaggaccccctcccaaagatactggcattgctcgagggccacttgctggagct
gctgggggcccaggaattggcagggctgctggcagaggaatcccagctggtgttcctatg
ccccaggctcctgcaggtcttgctggaccagtccgtggggttggtgggccatcccaacag
gtgatgacccctcaaggaagaggcactgttgcagcagctactgctgctgccactgccagt
attgcaggagctccaacccagtacccaccaggccgtgggggtcctccaccaccttgtatg
ggccgaggggcaccccctccaggcatgatgggcccacctcctggtatgaggcctcctatg
ggtcccccaatggggattccccctggacgagggaccccgatgggcatgccccctccagga
atgaggccccctcccccagggatgcgaggccttctttga

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