Marmota marmota marmota (Alpine marmot): 107142814
Help
Entry
107142814 CDS
T09644
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04217
Necroptosis
mmma04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
107142814
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107142814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107142814
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
107142814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
107142814
NCBI-ProteinID:
XP_015341802
Ensembl:
ENSMMMG00000007295
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
RPRPEVSGGPRAVSIPRHGRRIRLGSSAALHPSWALTICRPXAVLLAVHAAVRPLGAGPN
AEAQLRRLQLSADPERPGRFRLELRGAGPGAVSLEWPLESISYTIRGPSQHELQPPPGGP
GTLSLRFLNTQEAQQWAALLRGATAEGQNGSGSPLLALGPETCPVSSPSPPVVPTLKVPQ
PEVDLQSPGDLMEKEELTGLLAQAIAGGDEKGAAQIAAILAQRHVALSVQLQEACFPPGP
IRLQVTVEDATSAASSASSAHISLQVHAHCTISALREQVFSEFGFPPAVQRWVIGRWLCA
PERSLASYGVQQDGDPAFLYLLSTPQEAPGCSPQRLQKMEGELGRFFPQSLGLSRALQPA
SSSLPGPLQPGWSCPSCTFINAPNRPGCEMCSTQRPCTWDPLPTSSTQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
cgcccgcggccggaggtgtctggaggccctcgggccgtgtccatccctcggcacggcagg
cggatcaggctcggcagcagcgctgccctgcatccctcctgggccctgacgatctgccgc
ccccncgcagtgctcctggctgtgcacgccgcggtgagaccgctgggcgccgggcccaac
gcagaggcgcagctgcggaggctgcagctgagcgcggatcccgaaagacccgggcgtttc
cgactggagctgcgaggcgcggggcccggagcggtcagtctggagtggcccttggagtca
atctcctataccatccgcggccccagtcaacatgagttgcagcctccaccaggagggccc
ggaactctcagtctgcgcttcctcaacactcaggaagctcagcagtgggcagccttgctg
cgaggtgccaccgcagagggacagaatggcagtggcagcccactcctagccctgggccca
gaaacatgtcctgtttcctcacccagtccccctgtggtcccaacactcaaagtgccccaa
cctgaggtggatcttcagagccctggagacttgatggagaaagaagagctgactgggctc
ctggcccaggccattgcaggtggggacgagaagggggcagcccaaatagcagcaatcctg
gcccagcgtcacgtggccctcagtgtccagcttcaggaggcctgcttcccgcctggtccc
atcaggctgcaggtcacagttgaagatgccacatccgctgcatcctcggcatcctctgcc
cacatctcactgcaggtccacgctcactgtaccatctcagctctccgggaacaggtgttc
tcagagttcggtttcccacctgctgtgcaacgctgggtcattgggaggtggctgtgtgcc
cctgagcgcagccttgcttcctatggggtccagcaagatggggaccctgctttcctctat
ctgctctccactccccaagaagccccaggatgcagccctcaacgcttgcagaagatggaa
ggggaactaggacggttctttcctcagtcattggggctgtcccgtgccctgcagccagcc
agttccagcctccccggcccccttcagcctggctggtcctgtccttcctgtaccttcatc
aatgccccaaatcgccctggctgtgagatgtgtagcacccagaggccctgcacctgggac
ccccttcctacatcgtctacccagtag
DBGET
integrated database retrieval system