KEGG   Marmota marmota marmota (Alpine marmot): 107143780
Entry
107143780         CDS       T09644                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma04145  Phagosome
mmma04514  Cell adhesion molecules
mmma04612  Antigen processing and presentation
mmma04640  Hematopoietic cell lineage
mmma04658  Th1 and Th2 cell differentiation
mmma04659  Th17 cell differentiation
mmma04672  Intestinal immune network for IgA production
mmma04940  Type I diabetes mellitus
mmma05140  Leishmaniasis
mmma05145  Toxoplasmosis
mmma05150  Staphylococcus aureus infection
mmma05152  Tuberculosis
mmma05164  Influenza A
mmma05166  Human T-cell leukemia virus 1 infection
mmma05168  Herpes simplex virus 1 infection
mmma05169  Epstein-Barr virus infection
mmma05310  Asthma
mmma05320  Autoimmune thyroid disease
mmma05321  Inflammatory bowel disease
mmma05322  Systemic lupus erythematosus
mmma05323  Rheumatoid arthritis
mmma05330  Allograft rejection
mmma05332  Graft-versus-host disease
mmma05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    107143780
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107143780
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    107143780
   04612 Antigen processing and presentation
    107143780
   04658 Th1 and Th2 cell differentiation
    107143780
   04659 Th17 cell differentiation
    107143780
   04672 Intestinal immune network for IgA production
    107143780
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    107143780
   05164 Influenza A
    107143780
   05168 Herpes simplex virus 1 infection
    107143780
   05169 Epstein-Barr virus infection
    107143780
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    107143780
   05152 Tuberculosis
    107143780
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    107143780
   05140 Leishmaniasis
    107143780
  09163 Immune disease
   05310 Asthma
    107143780
   05322 Systemic lupus erythematosus
    107143780
   05323 Rheumatoid arthritis
    107143780
   05320 Autoimmune thyroid disease
    107143780
   05321 Inflammatory bowel disease
    107143780
   05330 Allograft rejection
    107143780
   05332 Graft-versus-host disease
    107143780
  09166 Cardiovascular disease
   05416 Viral myocarditis
    107143780
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    107143780
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mmma04147]
    107143780
Exosome [BR:mmma04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107143780
  Exosomal proteins of epithelial cells
   107143780
  Exosomal proteins of breast milk
   107143780
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 Ig_2 C2-set_2 I-set ig EFL1
Other DBs
NCBI-GeneID: 107143780
NCBI-ProteinID: XP_015343005
Ensembl: ENSMMMG00000024223
UniProt: A0A8C6AAM6
LinkDB
Position
Unknown
AA seq 263 aa
MTTLLPLLLGLSLGCTGAGGFVAHVESTCLLDDDRNPKDFTYCISFNKDLLACWNPEEGK
IAPCEFGTLYPLAQQISQYLNHNDNLLQRLRNGLQDCATHTQPFWKSLTNRTRPPSVQVA
QTTPFNTREPVMLACYVWGFYPAEVTITWMKNGQFINPNNSAQKTSQPNGDWTYQTVSHL
PLTPSYGDIYTCVVEHFGNPGLIFQDWTPGLSPVQTVKVSVSAVTLALGLIIFSLGCISW
RNSASSSYIPLPGSNYPEGRHIS
NT seq 792 nt   +upstreamnt  +downstreamnt
atgaccacactcctgccgctgctgctgggcctcagcctgggctgcacaggagcaggtggc
tttgtggcccatgtggaaagcacctgtctcttggatgatgacaggaatccaaaggacttc
acatattgtatctccttcaacaaggacctcttggcctgctggaatccagaagagggaaaa
atagccccttgtgaatttggaacactgtatccattggcccaacaaatctcacaatacctc
aaccataacgataatctgctgcagcgcttgcgcaacggactgcaggattgtgccacacac
acccagcccttctggaaatcactgaccaacagaacacgaccaccatctgtgcaagtagcc
caaaccactccttttaacacaagggagcctgtgatgttggcctgctatgtgtggggtttc
tatccagctgaggtgaccatcacgtggatgaagaatgggcagtttatcaaccctaacaac
agtgctcagaagacttcccagcccaatggagactggacataccaaaccgtttcccattta
cccttaaccccttcttatggggacatctatacctgtgtggtggagcattttgggaatcct
gggctaatctttcaggactggacacctgggctgtcccctgtgcagacggtgaaggtttcg
gtgtctgcggtgactctggccctgggcctcatcatcttctctcttggttgcatcagctgg
cggaattctgcatcctctagctacattcccctccctggatccaattatccagaaggacgg
cacatttcgtag

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