Marmota marmota marmota (Alpine marmot): 107148110
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Entry
107148110 CDS
T09644
Symbol
Rapgef6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04015
Rap1 signaling pathway
mmma04517
IgSF CAM signaling
mmma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
107148110 (Rapgef6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
107148110 (Rapgef6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107148110 (Rapgef6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
PDZ_6
cNMP_binding
RA_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
107148110
NCBI-ProteinID:
XP_048639129
Ensembl:
ENSMMMG00000014369
LinkDB
All DBs
Position
Unknown
AA seq
1488 aa
AA seq
DB search
MMWMLTVIFLFRRTQHLCLYVVLRIEPGPHACQLPADLTKMHLTDNPHPQVTHVSSSQSG
CSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEEEEDIDRTDPLQGRDL
VRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVDQAGAIILED
GQELDSWYVILNGTVEINHPDGKVENLFMGNSFGITPTLDKQYMRGIVRTKVDDCQFVCI
AQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKATPERLIMHLIEE
HSIVDPTYIEDFLLTYRTFLKSPLDVGIKLLEWFKIDSLRDKVTRIVLLWVNNHFNDFEG
DSAMTQFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRESPLNFSLNGGSE
KGFGIFVEGVEPGSKAADAGLKRGDQIMEVNGQNFENITFAKALEILRNNTHLALTVKTN
IFVFKELLSRIEQEKYGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQEKGNKKVKANTVSG
GRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMPIPGTLSSSSPD
LLQPTTSILDFSNPSAVGFYYIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHAVHEFGL
TGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLCSDEDAQ
ELVKESQLSMLQLSTIEMATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHLKEFEDI
VNQETFWVASEILTESNQVKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVARLR
GTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDMTFLHEG
NDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQGSTNSNM
LDVQGGAHKKRTRRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSLQWEPGY
GTLTKNLSEKRSAKSSEMSPVPLRSAGQTAKAHLHQSHRVSQVLQVPAVNLHPIRKKGQA
RDPTLSSSLPQKVLGPTEEISGKKHTEDTVSVASSLHSSPPASPQGSPRKGYALIPSAKS
DNLSDSSHSEISSRSSIVSNCSVDSMSTTLQDERCSQTMAIPESTGTLEKTEHSLGIGDH
TQLGPGWMLSKPSLIKGLAVSASMSNEEISHEHVVIEAADSGRGSWTSCSSSSHDNFQSL
PNPKSWDFLNSYRHTHLDDPIAEVEPTDCEPYSCPKGCSRTCGQCKGNLETNQLRQSWAS
SSSLSDTYEPNYGTVKRRVLESIPTESSDSLDPKDATDPVYKTVTSSTEKGLIVYCVTSP
KKDDRYREPPPTPPGYMGISLADIKEGPHLHLKPPDYSVAVQRSKMMHNSLSRLPPASLS
SSPVAYVPSKIVTQSQRHNLEPSHPKLADVTDADSEADGMLTTYLNGS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggatgttaacagttatctttctttttcggcggacacaacatctttgtttgtat
gtggtgctgaggatcgaacccggaccgcacgcatgccagcttccagctgatcttaccaag
atgcacctcacagacaaccctcatccacaggtgactcatgtgtcttctagtcagtctggt
tgtagcattgccagtgattctgggagcagcagtttatctgatatctatcaggctacagag
agtgaagtaggagatgtagatttaacacgtcttccagaaggacctgttgattctgaggat
gaagaagaagaagaagaggaagatattgatcgaacagatccattgcaggggcgagatctt
gttcgagaatgtcttgaaaaagaacctgcagacaaaactgatgatgacattgaacaatta
cttgaatttatgcaccagcttcctgcttttgcaaacatgaccatgtctgtaaggagagag
ctctgctcagtgatgatttttgaagtggtggatcaggctggagctattattcttgaggat
gggcaagagcttgattcatggtatgttattttaaatggcactgtagaaattaatcatcca
gatggaaaagttgaaaatctctttatgggaaatagttttggaattactcccactcttgat
aagcagtacatgcgtggtattgtcagaactaaagtagatgattgtcagtttgtctgcata
gcccagcaggattattggagaattttaaatcatgtggaaaaaaatacccataaagttgaa
gaagaaggagaaattgttatggtgcatgagcaccgcgaattagaccggagcggaaccagg
aaaggacacatcgtaatcaaggcaacacctgagcgtctcattatgcatttaatagaagaa
cattccattgtggacccaacttatatagaagatttcttattaacttataggacatttctt
aaaagtcctttggatgttggaatcaagcttttggaatggtttaagattgacagcttaagg
gataaggtgacacggattgtattattatgggtaaataatcattttaatgattttgaaggt
gattctgctatgactcagtttctggaagaatttgaaaaaaatctggaagatacaaaaatg
aatggtcatcttaggttattgaatatcgcctgtgctgcaaaggctaagtggagacaggtt
gtgctacaaaaggcttctcgagagtcacctttgaatttcagccttaatggaggaagtgag
aagggatttggtatttttgttgaaggagtagaacctggtagcaaagctgctgatgcagga
ctgaaacgtggtgatcagataatggaagtaaatggacagaattttgagaatattacattt
gcaaaggcccttgaaattttgaggaataatactcatcttgcactaactgtgaagaccaat
atttttgtattcaaagagttgcttagtaggattgaacaagagaaatatggtgttcctcat
attccaaaaattgctgaaaaaaaaagtaatcggcactcaattcaagatgtcccaggagat
attgaacagacatcacaggagaaaggaaataagaaagttaaagcaaatactgtttcaggt
ggaagaaacaaaatcaggaaaattctggataaaacaagatttagtatcttgcctccaaag
ctatttagtgatggaggcctgagccaatcacaagatgacagcattgtgggaacaaggcat
tgtagacacagcctagctataatgcctattcctggaacactctcatccagtagccctgat
ctcctacagcctactaccagcatattggacttttccaatccttcagctgttggtttttac
tatattcctgatcaagttataagagttttcaaagcagatcagcaaagttgctacattatc
atcagtaaagacactacagctaaagaagtagtttgtcatgctgttcatgaatttggtttg
actggtgcatccgacacatattctctttgtgaagtttctgttactccagagggtgtcata
aagcagagaagacttcctgaccagttctccaaattagctgatagaattcaactcaatgga
aggtattatttaaaaaataatatggaaacagaaactttatgttcagatgaagatgctcaa
gaactagttaaagaaagccagttatccatgctgcagctcagtaccattgagatggccacc
caattatcaatgagggactttgatttatttcgtaatattgagcctactgaatatattgat
gacctttttaagttggattccaaaacaggaaatactcacttgaaagagtttgaggacatt
gtaaaccaagagacattctgggttgcctcagagattttaaccgaatcaaatcaagtcaaa
cgaatgaaaattattaagcattttattaaaattgcacttcattgtcgagaatgtaagaac
ttcaattccatgtttgcaataataagtggcttgaacttggcacctgtagcacgactcaga
ggtacttgggaaaagttaccaagcaaatatgagaaacatctccaagatctacaagacctt
tttgatccatctagaaacatggcaaaatatagaaatattcttagtagtcaaagtatgcag
cctccaattattccactgttccctgttgtcaagaaggatatgacatttctacatgaagga
aatgactccaaagtagatggtttagtaaacttcgagaagctaagaatgattgccaaggaa
atccgtcaagttgttcgaatgacttctgctaatatggacccagctatgatgtttcgacag
aggaagaagaggtggcggagtctggggtcactcagtcaaggcagcacaaattcaaacatg
ctggatgttcagggaggtgctcacaaaaaaaggacacgccgcagctctctgctcaatgcc
aagaagctgtatgaggatgcccaaatggcaaggaaagtaaagcagtatctttctagtctg
gatgtagagacagatgaggagaagttccagatgatgtcattgcagtgggagcctggatat
ggtaccttgaccaagaatttaagtgagaaaagatctgccaagtcatctgaaatgtctcca
gtgcctctgaggtcagctggccaaacagctaaagcccacttacatcagtcccacagagta
agccaggttcttcaggtaccagctgttaatttgcaccccatcaggaagaagggacaagca
agagaccctacattgagttcaagtttacctcagaaagttttaggaccaaccgaagaaata
agtggtaagaaacatacagaagacactgtgtctgtggcatcatctttacattctagtcct
cctgcatctcctcaaggttcccctcgcaaaggttatgcacttataccatcagctaaatcg
gacaacttgtcggactccagccatagcgagatctcttcacggtccagcatcgtgagcaat
tgttctgttgactccatgtctacaactctacaggatgaacgatgttctcagaccatggca
atccctgaatccactgggacattggaaaagacagagcactccttagggataggagaccat
actcagcttggtcctgggtggatgctttcaaaaccatctttaatcaagggtttagctgtc
tcagcttctatgagcaatgaagagatttctcatgagcatgttgttattgaagcagctgat
agtggtcgtggaagttggacttcctgttcaagcagctcccatgacaactttcagagcctt
ccaaacccaaaaagctgggactttttgaactcctataggcatactcatttggatgatccc
attgctgaagtggaacccactgactgtgagccctactcctgtcctaaaggctgctctaga
acttgtggccagtgtaagggaaacctagagactaatcagttgagacaaagttgggcctcc
tccagttctctctctgatacatatgaaccaaattatgggacagttaaacggagagtatta
gagagcatccccactgagtcatctgacagcttggacccaaaggatgccactgacccagtt
tataaaactgtcacttcaagcacagaaaagggcttgattgtgtactgtgtaacttcaccc
aagaaggatgataggtatagggagccacctcctactcctccaggatatatgggaatttct
ttagcggacataaaagaaggaccccacctgcacctaaaacctccagattatagtgtggca
gtgcaaaggtcaaagatgatgcataacagcctttctagactgccaccagcttctctcagt
agcagccctgtggcgtatgttccatcgaagattgtaactcagtctcagaggcataatttg
gagccatcccatcctaaactagcagatgtgactgatgcagatagcgaagcagatggtatg
ttgacaacctaccttaatgggtcttaa
DBGET
integrated database retrieval system
