Marmota marmota marmota (Alpine marmot): 107149065
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Entry
107149065 CDS
T09644
Symbol
Irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107149065 (Irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107149065 (Irf5)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107149065 (Irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
107149065
NCBI-ProteinID:
XP_015349330
Ensembl:
ENSMMMG00000014159
UniProt:
A0A8C6EU21
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MNQPAPGAPPPPRRVRLKPWLVAQVNSCQYPGLQWVNGERKFFYIPWRHATRHGPSQDGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSNGPAPTESQPTEDYSVCTEEEEEEEELQRMLPGLSITETVQPGPPMASYLPKEDAKWS
PALQPPVGLGPPAPAPNLLAPPHGDAAGFGHLLPGVLPNVEPGPLDASLPPTGEQLLPDL
LISPHMLPLTDLEIKFQYRGRPPCALTISNPQGCRLFYSQLEATQEQVELFGPVSLEQVR
FPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCATAHGSSP
NPIQREVKTKLFSLEQFLNELILFQKGQTSAPPPFEIFFCFGEEWPDRKPREKKLITVQV
VPVAARLLLEMFSGELSWSADSIRLQISNPDLKDHMVEQFKELHHIWQSQQQLQPVAQAP
PVAGLGAEQRPWPMHPVSMQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccagcccctggggctcccccgccaccccgccgggtgcggctgaagccctgg
ctggtggcccaggtgaacagttgccaatacccaggacttcagtgggtcaacggggaaagg
aaattcttctacatcccctggcgccatgccaccaggcatggtcccagccaggacggagac
aacaccatcttcaaggcctgggccaaggagacggggaaatatactgagggggtggatgag
gctgatccagccaagtggaaggccaacctgcgctgtgcccttaacaagagccgggacttc
cgcctcatctatgatgggccccgggacatgccgcctcaaccctacaagatctacgaggtc
tgctccaatggccctgctcccacagagtcccagcccactgaggattatagtgtatgtaca
gaagaagaggaggaagaagaagagctccagaggatgttaccaggcctgagcatcacagaa
acagtgcagcctggccccccaatggcatcctatttacccaaagaagatgccaagtggtca
ccagctctccagccacctgtggggctgggtcccccagctccagcccccaacctcctggca
cctcctcatggcgacgctgctggctttgggcatcttctccctggggtcctgccgaacgtg
gagcctgggcccctggatgccagcctgccccctacaggagagcaactcttgcctgacctg
ctgatcagcccccatatgctgcctttgacagacctggagatcaagttccaataccggggg
cggccaccctgtgcccttaccatcagcaacccacaaggctgccggctcttctatagccaa
ctggaggccacccaagagcaggtggaactctttggccctgtgagcctggagcaagtgcga
ttccccagccctgaggacatccccagtgacaagcaacgcttctacaccaaccagctgctg
gatgtcctagaccgagggctcatcctccagttgcagggtcaagacctgtatgccatccgt
ctctgccaatgcaaggtgttctggagcgggccctgtgccacagcccatggctcaagcccc
aaccccatccagcgggaggtcaagaccaagctcttcagcctggagcagtttctcaatgag
ctcatcctgttccagaagggccagaccagtgccccaccaccctttgagattttcttctgt
ttcggggaagagtggcctgaccgaaaaccccgagagaagaagctcattactgtacaggtc
gtgcctgttgcagccaggttgctgctggagatgttctcgggggagctttcttggtcagct
gacagcattcgcctacagatctcaaacccagacctcaaagaccacatggtggagcagttc
aaggagctccatcacatctggcagtctcagcaacagctgcagcctgtggcccaggcccct
ccagtggcaggccttggtgctgaacaaaggccctggcccatgcacccagtcagcatgcaa
taa
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integrated database retrieval system
