Marmota marmota marmota (Alpine marmot): 107150147
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Entry
107150147 CDS
T09644
Symbol
Lsm3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03018
RNA degradation
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107150147 (Lsm3)
09123 Folding, sorting and degradation
03018 RNA degradation
107150147 (Lsm3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107150147 (Lsm3)
03041 Spliceosome [BR:
mmma03041
]
107150147 (Lsm3)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107150147 (Lsm3)
mRNA degradation factors
5'-3' decay
Lsm complex
107150147 (Lsm3)
Spliceosome [BR:
mmma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107150147 (Lsm3)
Complex C
U2 snRNP components
107150147 (Lsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
UPF0302
DUF150_C
Motif
Other DBs
NCBI-GeneID:
107150147
NCBI-ProteinID:
XP_015350587
LinkDB
All DBs
Position
Unknown
AA seq
134 aa
AA seq
DB search
MAGLVIRVQESPPPVTQQGRHPNSAPPLVSLPKPVFFYQQQTTNTVEEPLDLIRLSLDER
IYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEETYEEIYKSTKRNIPMLFVR
GDGVVLVAPPLRVG
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcaggattggtaatccgagttcaggagagtccgcccccagtgacacagcagggcaga
catccaaactccgcgccccctctagtatcacttcctaagcctgttttcttttaccagcaa
caaaccaccaacaccgtagaggagccgctggacctcatcaggctcagcctggatgagcgc
atttacgtgaagatgagaaatgaccgagagctgcgaggcaggttacatgcttacgatcaa
cacttgaatatgatcctgggcgacgtggaggaaaccgtgaccacgatagagatcgacgaa
gagacgtatgaagagatctataagtcaaccaagcggaacattccgatgctctttgttcgg
ggagacggggtcgtgctcgtcgcccctccgttgagagtcggctga
DBGET
integrated database retrieval system
