KEGG   Marmota marmota marmota (Alpine marmot): 107150537
Entry
107150537         CDS       T09644                                 
Symbol
Brca1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X2
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma01524  Platinum drug resistance
mmma03440  Homologous recombination
mmma03460  Fanconi anemia pathway
mmma04120  Ubiquitin mediated proteolysis
mmma04151  PI3K-Akt signaling pathway
mmma05206  MicroRNAs in cancer
mmma05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107150537 (Brca1)
  09124 Replication and repair
   03440 Homologous recombination
    107150537 (Brca1)
   03460 Fanconi anemia pathway
    107150537 (Brca1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    107150537 (Brca1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    107150537 (Brca1)
  09162 Cancer: specific types
   05224 Breast cancer
    107150537 (Brca1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    107150537 (Brca1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mmma01009]
    107150537 (Brca1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mmma04121]
    107150537 (Brca1)
   03036 Chromosome and associated proteins [BR:mmma03036]
    107150537 (Brca1)
   03400 DNA repair and recombination proteins [BR:mmma03400]
    107150537 (Brca1)
Enzymes [BR:mmma01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107150537 (Brca1)
Protein phosphatases and associated proteins [BR:mmma01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107150537 (Brca1)
Ubiquitin system [BR:mmma04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107150537 (Brca1)
  Multi subunit type E3
   BRCC complex
    107150537 (Brca1)
Chromosome and associated proteins [BR:mmma03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     107150537 (Brca1)
DNA repair and recombination proteins [BR:mmma03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     107150537 (Brca1)
    BRCA1-A complex
     107150537 (Brca1)
    BRCA1-B complex
     107150537 (Brca1)
    BRCA1-C complex
     107150537 (Brca1)
    BRCA complex
     107150537 (Brca1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     107150537 (Brca1)
SSDB
Motif
Pfam: BRCT_assoc BRCT zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4_3 zf-RING_2 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 BRCT_2 zf-RING_6 zf-Nse zf-ANAPC11 zf-RING_10 zf-rbx1 RTT107_BRCT_5 Prok-RING_4 Baculo_IE-1
Other DBs
NCBI-GeneID: 107150537
NCBI-ProteinID: XP_015351119
LinkDB
Position
Unknown
AA seq 1874 aa
MLCSGSMEQKEMDLSAVRVEEVQNVLNAMQKILECPICLELIKEPVSTKCDHIFCKFCML
KLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKMIHAFELDTGLQFANSYNFPK
KENNSPEHLKEEISIIQSMGYRNRAKRLRESEPENPTLETSLSVQLSNLGIMKSLRTKQQ
IQPQNKSVYIELGSDSSEDTVNKANYCSVRDQELLQTTTQGARAETSVDSANKAACEFSE
KDIANIEHHQSSNKDLNIIEKHATERHPEKYQGISVSNLHVEPCGTNTRASSLQHENGSL
LLTKDRMNVEKAEFCNKSKQPGLARSQQSRWAKSKETCNDRQTLSTEKKVDLNVDPLYEK
KEPSKQKPPCSENSRDTQDVPWITLNSSIQKVNEWFSRSDEMLTSDDSHDGGSESNAKVA
GVLEIPNEVDGFSGSSEKIDLLATDPHNALIFKRERICSKAVESNIEDKIFGKTYQRKAS
LPNLSHVTENLIIGAFATEPQITQERPLTNKLKRKRRTTSCLHPEDFIKKAGLAVVQKTP
EKINQGTDQMEQNDQVMNITNSVQENETKVDFVQKEKNANPVESLEKESAFRTKAEPISS
SISNMELELNIHNSKAPTKNRLRRKSSTKHIHALELAVNRNTSPPHHIELQIDSFTSSEE
IKTGNSNQMPVRHGKKLQLMEDAEPATEVKKSNQPNEQIIKRYTSDVFPEPKLTGISGLF
TNCSSSSKVKEFVNPNLQKEGTEENIEIIQRSNNTKDPKDVLSGERGLQTERSAESTSIS
LVPDTDYGTQDSISLLEANTSGKARIASNQHVTQYVAIENPKEFIHGHPKDTRNDTGGYK
NSLRHDVNHIQEINVEMEESELDTQYLENTFQVSKRQSFALFSNPGNQEKECAAVYAPSQ
TLQKQSTEVNLECEQKDKNWGNKESKIPHVQAINATMGFPVVCQKNKPGDDAKCNTTEVS
RICPSFPFRGSETKLITAYKHGILQNPYHMPSVSPIRSSVNTKCKKNLLGEKFEKHSRSP
EKVVGYKRIIQSTVSTISQNNIRESAFKEANSGSINEVGASTNEVGSSINEVGSSGENIQ
TELGRNKGPKLNAVLRLGLMQPEAYKQNLSLINCKYPEIKRQGEDKVVQVVNTDFSPCLI
SDNLEQPMRISPVTQVCSETPDDLLDDDDDEIKENTSFTEGGIKEKSAVFSKNVQRGEFS
RSPSPLAHTSLAQSHQKGARKLESSEENTCSEDEELPSFQHLLFGKVTKTPQSTKHSTVV
TDCLSKKTEENLVSFRTGVNNCNNEVILEKASQEHHFSEEAKYSGSLFSSQCSVLEDLTT
NTNSQDPFLMFDPLKHQSENQEVVLSDNKLVSNDEERETGLEEDNHQEEQSVDSDLGEAA
SGYESETVLSEDCSGVSSQSDILTTQQRDTMQDNLIKLQQEMAQLEAVLEQHGSQSSDNS
PSLVADSCAPEDLPDLEQNLSGEVLTSQKSNEYPVSLNPKKLSPDKFWVSPNRSISKNKE
LEIKRSSPTSKSQLVDNRWSVHSHTTSLQNRNSPSQEDLIKIVDVEEQELKKSEPPDLME
QSYLPKQDLEGTPYLESGISLFSKDPDSDPPEDKAPEAVHVCSVPASTSALKLSQFQVGQ
SANSPAVAHTTSTAGYNAREESMSREKPEFTSPTERTKQRISMVVSGLTPKELMLVHKFA
KKHHINLSNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKIL
DEHDFEVRGDVVNGRNHQGPKRARESQGRKIFRGLKICCYGPFTNMPTDQLEWMVQLCGA
SVVKEISSLTLDTGAQPIVVIQPDAWTEDNGFHAIEQMGKAPVVTREWVLDSVALYQCQE
LDTYLIPQISPSHC
NT seq 5625 nt   +upstreamnt  +downstreamnt
atgctttgctctggttcaatggaacagaaagaaatggatttatctgcagttcgtgttgaa
gaagtacaaaatgtccttaatgctatgcagaaaatcttagagtgtccaatttgtctggaa
ttgatcaaagaacctgtttccacaaagtgtgaccacatattttgcaaattttgtatgctg
aaacttctcaaccagaagaaagggccttcgcagtgtcctttgtgtaagaatgatataacc
aaaagaagcctacaagaaagtacaagatttagtcaacttgttgaagagctattgaaaatg
attcatgcttttgagcttgacacagggttacagtttgccaacagttataactttccaaaa
aaggaaaataactctcctgaacatttaaaggaagagatttctatcatccaaagtatgggc
taccgaaaccgtgccaaaagacttcgagaaagtgaacctgaaaatcctaccttggaaacc
agtcttagtgtccaactctctaaccttggaatcatgaaatctctgaggacaaagcagcag
atacaacctcaaaataaatctgtctacattgaattaggatctgattcttctgaagataca
gttaataaggcaaattattgcagtgtgagagaccaggaattgttgcaaaccaccactcaa
ggagccagggctgaaaccagtgtggattctgcaaataaggctgcttgtgagttttctgag
aaggacatagcaaatattgaacatcatcaatccagtaataaagatttgaacatcattgag
aagcatgcaactgagaggcatccagaaaagtatcagggtatttctgtttcaaacttgcat
gtggagccatgtggcacaaatactcgtgccagctcattacagcatgagaacggcagttta
ttactcactaaagacagaatgaatgtagaaaaggctgaattctgtaataaaagcaagcag
cctggtttagcaaggagccaacagagcagatgggctaaaagtaaggaaacctgtaacgat
aggcaaactctcagcacagagaaaaaggtagatctgaatgttgatcccctatatgagaaa
aaagaaccaagtaagcagaaacctccatgctctgagaattctagagatacccaagatgtt
ccttggataacactaaatagcagcattcagaaagttaatgagtggttttccagaagtgac
gaaatgttaacttctgacgactcacatgatgggggttctgagtcaaatgctaaagtagct
ggtgtattagaaattccaaatgaagtagatggattttctggttcttcagagaaaatagac
ttgttggccactgacccgcataatgctttaatttttaaacgtgaaagaatctgctccaaa
gcagttgagagtaatattgaagataaaatatttgggaaaacctatcagaggaaggcgagc
ctccctaacttgagccatgtaactgaaaatctaattataggagcatttgccacagaacca
caaataacacaagagcgtcccctcacaaataaattaaagcgtaaaaggagaactacatca
tgccttcatcctgaggattttatcaagaaagcaggtttggcagttgttcaaaagacccct
gaaaaaataaatcagggaactgaccaaatggaacagaatgatcaagtaatgaatattact
aatagtgtccaagagaatgaaacaaaagttgattttgttcagaaagagaaaaatgctaac
ccagtagaatcattggaaaaagagtctgctttcagaactaaagctgaacctataagcagc
agtataagcaatatggaactagaattaaatatccacaattcaaaagcacctacgaaaaat
aggctgaggaggaagtcctctactaagcatattcatgcgcttgaactagcagtaaataga
aatacaagtccacctcatcacattgaattacaaattgatagttttactagcagtgaagaa
ataaagacaggaaattccaaccaaatgccagtcaggcatggcaaaaagcttcaactcatg
gaagatgcagaacctgcaactgaagtcaagaagagtaaccagccaaatgaacaaataatt
aagagatataccagtgatgttttcccagaaccaaagttaacaggcatatctggtcttttt
actaactgctcaagttctagtaaagttaaagaatttgtcaatcctaaccttcagaaagaa
ggaacagaagagaacatagaaataattcaaaggtctaataataccaaagaccccaaagat
gtgctaagtggagaaaggggtttgcaaactgaaagatctgcagaaagtaccagtatttca
ttggtacctgatactgattatggcactcaggacagtatctcattactggaagctaacact
tctggaaaagcaagaatagcatcaaatcaacatgttactcagtatgtggcaatcgaaaac
cccaaggaatttatccatggtcatcctaaagatactagaaatgacacagggggttacaag
aattcattgagacacgatgttaaccacattcaggagataaatgtagaaatggaagaaagt
gaacttgatactcagtatttagagaatacattccaagtttcaaagcgtcagtcatttgct
ctgttttcaaatccaggaaatcaagaaaaggaatgtgcagctgtctatgctccctctcaa
accttacagaaacaaagcacagaagtcaatcttgaatgtgagcaaaaagacaaaaattgg
ggaaataaagagtctaaaattccgcatgtccaggcaattaatgccactatgggcttccct
gtggtttgtcagaaaaataagccaggtgatgatgccaaatgtaatactacagaagtctct
agaatttgtccttcatttccgttcagaggcagtgaaactaaacttattactgcatataaa
catggaattttacaaaacccatatcatatgccatcagtttctcccatcaggtcatctgtt
aacactaaatgtaagaaaaacctattaggggaaaagtttgagaaacattcaaggtcacct
gaaaaagtagtgggatataagagaatcattcaaagtacagtgagcacaattagccaaaat
aacattagagaaagtgcttttaaagaagccaactcaggcagtattaatgaagtaggcgct
agtactaatgaagtaggctccagtattaatgaagtaggttccagtggtgaaaacattcaa
acagaactaggtagaaacaaaggacccaaattaaatgctgtgcttagattaggtcttatg
caacctgaagcctataaacaaaatctttctctaattaattgtaaataccctgaaataaaa
agacaaggagaagataaagtagttcaagttgttaatacagatttctctccatgtctaatt
tcagataatttagaacaacctatgagaattagtcctgtcactcaggtttgttctgagact
ccagatgacctgttagatgatgatgatgatgaaataaaggaaaataccagctttactgaa
ggtggcattaaggaaaaatctgctgtttttagtaagaatgtccagaggggagaatttagc
aggagcccaagccctttagcccatacatctttggctcagagtcaccaaaagggggccagg
aaattagagtcctcagaagagaacacctgtagtgaggatgaagaacttccctccttccaa
cacttactatttggtaaagtaaccaaaacacctcagtctaccaaacacagcactgttgtg
acagactgtctgtctaagaaaacagaggagaacctggtatcatttaggactggtgtaaat
aactgcaataatgaggtgatactggaaaaggcctcccaggaacatcactttagtgaggaa
gcgaaatactctggtagcttgttttcttcccagtgcagtgtattagaagacttgacaaca
aatacaaactcccaggaccccttcttgatgtttgatcctctgaaacatcagtctgaaaac
caggaagttgtgctgagtgacaacaaattggtttcaaatgatgaagaaagggaaactggc
ctagaagaagataatcaccaagaagagcagagtgtggattcagacttaggtgaagcagca
tctggctatgaaagtgaaacagtcctctctgaagattgctcaggggtgtcctcgcagagt
gatattttaaccactcagcagagggataccatgcaagataacctgataaagctccaacag
gaaatggctcaactggaagcagtgctagaacagcatgggagtcagtcttctgacaactcc
ccttccctcgtagctgactcttgtgcccctgaggacctgccagatctggaacaaaaccta
tcaggtgaagtgttaacgtcacagaaaagtaatgaatatcctgtaagtctgaatcctaaa
aagctttctcctgacaagttctgggtatctccaaatagatccattagtaaaaacaaagaa
ttggaaataaaaaggtcttcccccacttctaaatcccagttagtagataataggtggtct
gtacatagtcacactacgagtcttcaaaacagaaactctccctctcaagaggatctcatt
aagattgttgatgtggaagagcaagaactgaaaaagtctgagccacctgatttaatggaa
cagtcttacttgccaaagcaagatctagagggaaccccttacctggaatctggaatcagc
ctcttctctaaggaccctgattctgatccccctgaagacaaagccccagaggcagttcat
gtttgcagtgtaccagcttcaacctctgcattgaaattatcccagtttcaagttggacaa
tctgccaacagtccagctgttgctcacactactagtactgctgggtataacgcacgggaa
gaaagtatgagcagggagaagccagaattcacatctccaacagaaaggaccaagcagaga
atatccatggtggtatcgggcttgacccccaaagaacttatgcttgtacacaagtttgcc
aaaaaacaccatatcaatttaagtaatctaattactgaagagactactcacgtcgttatg
aaaacagatgctgagtttgtgtgtgaacggacactgaaatattttctcggaattgcagga
ggaaaatgggtagttagctatttctgggtgacccagtctattaaagaaagaaagatccta
gatgagcatgattttgaagtcagaggagatgtagtcaatggaagaaaccaccaaggtcca
aagcgagcaagagaatcccagggcagaaagatcttcaggggcctaaaaatctgttgctat
gggccttttaccaacatgcccacagatcaactggaatggatggtgcaactgtgtggagct
tctgtggtaaaggaaatttcgtcactcacccttgacacaggtgctcagccaattgtggtt
atacaaccagatgcctggacagaagacaatggcttccatgcaattgaacagatgggtaag
gcacctgtggtgaccagagagtgggtgttggacagtgtagccctctaccaatgccaggag
ctggacacctacctgataccacagatctcacccagccactgctga

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