Marmota marmota marmota (Alpine marmot): 107151403
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Entry
107151403 CDS
T09644
Symbol
Arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04270
Vascular smooth muscle contraction
mmma04611
Platelet activation
mmma04810
Regulation of actin cytoskeleton
mmma04928
Parathyroid hormone synthesis, secretion and action
mmma05135
Yersinia infection
mmma05163
Human cytomegalovirus infection
mmma05200
Pathways in cancer
mmma05205
Proteoglycans in cancer
mmma05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107151403 (Arhgef1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
107151403 (Arhgef1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
107151403 (Arhgef1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
107151403 (Arhgef1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107151403 (Arhgef1)
05205 Proteoglycans in cancer
107151403 (Arhgef1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
107151403 (Arhgef1)
09171 Infectious disease: bacterial
05135 Yersinia infection
107151403 (Arhgef1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
107151403 (Arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107151403 (Arhgef1)
Membrane trafficking [BR:
mmma04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107151403 (Arhgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
AbiJ_NTD3
SOS1_NGEF_PH
SET_assoc
Motif
Other DBs
NCBI-GeneID:
107151403
NCBI-ProteinID:
XP_015352255
Ensembl:
ENSMMMG00000016411
LinkDB
All DBs
Position
Unknown
AA seq
966 aa
AA seq
DB search
MEDVARGVAPGPPRPGLVPVSIIGAEDEDFENELEASSEEQNSQFQSLEQVKRRPAHLMA
FLQHVALQFEPGPLLCCLHADMLGSLGPKETKKAFLDFCHSFLDKTAVLRVPAPSSVTFE
LDRTRPDLLSEDVQRRFMQEVVQNQQATVGRQLEDFRSKRLMGMTPWEQELAQLEAWVGR
DRASYEARERHVAERLLTHLEEMQHTISNDEEKSAAVVTAISLYMRHLGVRTKSGDKKSG
RNFFRKKMMGNKRSDEPPKTKKGLSSILDAARWNRGEPQAPDFRHLKSEVDAEKLGPTDR
KGALGMPSRDRNVGTSGQDTPGVPLHPLSGDSPDREPGVDAPLDLGDPPPQGTVNLEPPA
PPESTEESAETERRWKRLSGRLGRSESLRVSDRRRPSRGSLVAKGRGGGRSRSDVDMDPS
SATAVLGPARRATPEPGDEGEPGRSGLELEPEEPPGWRELVPPDILLNLPKSQVKRQEVI
SELLVTEAAHVRMLRVLHDLFYQPMADGGFFPLEELQNIFPSLDELIEVHSLFLDRLMKR
RQESGCLIEEIGDVLLARFDGAEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCTFVQ
DAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPTEREKVELAAECCREILHH
VNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKD
KAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATD
HKAFYVIFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVPAPASRPKPRPSPSSIR
EPLLSSSENGNCSREMPPADARTERIFSDLLPFCRPGPEGQLAATALQKVLSLKQLLFPA
EEDNGAGPPRNGDEVPGGSPLGPVQTQEIQENLLSLEEAIKQLEELEEELCRLRPLLSQL
GGNTVP
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtcgcccgaggggtggctccagggcccccgcggcctggcctggtgcccgtc
agcatcatcggggctgaggatgaggatttcgagaatgagctggaggctagctcagaggag
caaaacagccagttccagagcctggagcaggtgaagaggcgcccggcccacctcatggcc
ttcctacagcatgtggccctgcagtttgagccaggacctctgctctgctgcctgcatgcc
gacatgctgggctccctgggccccaaggagaccaagaaggccttcctcgacttctgccac
agcttcttagataagaccgcggtcctacgggtgccagccccttccagcgtcacctttgaa
cttgaccgcacacggcctgacctcctctctgaggatgtccagcggcggttcatgcaggag
gtggtgcagaaccagcaggcaaccgtgggcaggcagctggaggacttccgctccaagcgg
ctcatgggcatgacgccctgggagcaggagctagcccagctggaggcctgggttgggcgg
gaccgagccagctacgaggcccgcgaacggcatgtggccgaacgactgctgacccacctg
gaggagatgcagcataccatctctaacgacgaagaaaagagtgctgctgtggtgactgcc
atcagcctgtacatgcgccaccttggggtgcggaccaagagcggggacaagaagtcaggg
aggaacttcttccggaaaaagatgatggggaacaagcggtcagatgagcctcctaagacc
aagaaaggactgagcagtatcctggatgctgctcgctggaacaggggagagccccaggct
ccagattttcgacacctcaaaagcgaggttgatgctgaaaagctaggccctacagaccgg
aagggagccctgggaatgccttctcgggaccggaatgttgggacttctggacaggacacc
cctggagtccctctgcaccctttgtctggagacagcccagaccgggaaccaggtgtggat
gcccccctggacctgggggacccacccccacagggcacagtgaatttggagcccccggcg
cccccagagagcacagaggagagtgctgagacggagagaaggtggaagaggctgtcaggg
cgtctggggcgctcagagagcctgcgggtgagcgaccgccgccggccttcccggggcagc
ctcgtcgctaagggccggggtgggggccgctcccggagcgacgtggacatggaccccagc
tccgccacggccgtgcttggccctgcccgacgagccacccctgagcctggagatgagggg
gagccagggcggtcaggactagagctggaaccagaagagcctcctggctggcgggagctt
gtccctccggacatcctcctcaacctgcccaaaagccaggtgaagcggcaggaggtcatc
agcgagcttctggtgacagaggcagcccacgtgcgcatgctgcgggtgttgcatgacctc
ttctaccagcccatggccgatgggggcttcttcccgctggaggaactgcagaacatcttc
cccagcctggatgagctcatcgaggtgcactccctgttcctcgatcgcctgatgaaacgg
agacaggaaagtggctgcctcattgaagagattggcgacgtgctgttggccaggtttgat
ggtgccgagggctcctggttccagaaaatctcctcccgcttctgcagccgccagtcattt
gccttagagcagctcaaggccaaacagcgcaaggagccccgattctgtaccttcgtgcag
gatgctgagagccgcccacggtgccgccgcctgcaactgaaggacatgatccccaccgag
atgcagcggctgaccaagtaccccctgctcctgcagagcatcgggcagaacacagaagag
cctacggaacgagagaaagtggagctggcagctgagtgctgccgggagattctgcaccat
gtcaaccaagccgtgcgtgacatggaggacttgctgaggctcaaagattaccagcggcgc
ctggacttgtcccacctgcggcagagcagcgaccccatgctgagcgagttcaagaacctg
gacatcaccaagaagaagctggtgcacgagggtccattgacgtggcgggtgactaaggac
aaagctgtggaggtccacgtgctgctgctggacgacctactactactgctccagcgccag
gacgagaggctgctgctcaagtcgcacagccggacgctcacgcccacgcccgacggcaag
accatgctgcggcctgtgctgcggctcacctccgccatgacccgcgaggtggccaccgat
cacaaagccttctacgtcatttttacctgggaccaagaggcccaaatatatgagctggtg
gcacagaccgtgtcagagcggaagaactggtgtgccctcattactgagactgctggatcc
ctgaaggtccccgcccctgcctcccgccctaaaccccgacccagcccaagcagcatccgg
gaacccctgctcagcagctctgagaatggcaactgcagccgagagatgcctccagctgac
gcccggactgagagaatcttcagtgacctcctgcccttctgccgaccaggccctgagggc
cagcttgctgccacagcccttcagaaagtgctgtccctgaagcagctcctgtttcctgcg
gaggaagacaacggggctgggcctcctcggaacggggatgaggtgccaggtggcagccct
ctgggcccagtgcagacccaggaaattcaagagaacctgctcagcctggaagaggccata
aagcagctagaggaattggaggaggaactgtgccgcctgcgacctctcctgtctcagctc
ggggggaatactgtcccctag
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