Marmota marmota marmota (Alpine marmot): 107152259
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Entry
107152259 CDS
T09644
Name
(RefSeq) LOW QUALITY PROTEIN: G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107152259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107152259
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
107152259
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107152259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
107152259
NCBI-ProteinID:
XP_048656071
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MMTEAPDVAVMKEQQMPGEVPAPEPAQEPVQEAPKGRKRKARTTEPKXPEEPKKPAESKK
SGKSPKSKEKQEKITDAFKVKRKVDRFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLM
AAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFTNMVERTTPSSKDLS
SKEFREGGRILVQKLQKYQPXIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET
LCCVMPSSSARCAQFPPAQDKVHYYIKLKDLRDQLKGIERNADVQEVQYMFDLQLAQEDA
KKMAVKEEKYDPGYEAAYGGAYTEHLGNSEPCNFSEDRLTADSAELRGESAFSDIPNGQW
MTQSFTDQIPSFNNHCGKLEQGEGNPA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgaagctcctgatgtggcagtcatgaaggaacagcagatgccaggcgaagtt
ccagccccagagcctgctcaggaaccagtacaagaggctccaaaaggaaggaaaagaaaa
gccagaacaactgaaccaaaanatccagaggaacccaaaaaacctgctgagtccaagaag
tctggcaagtccccaaaatcaaaagaaaagcaagaaaagattacagatgcgtttaaagta
aaaagaaaagtggaccgttttaatggggtttccgaagcagaacttttgaccaagactctc
cctgatattttgaccttcaatctggacattgtgattattggcatcaacccaggactaatg
gctgcttacaaagggcatcattatcctggacctgggaaccatttttggaagtgtctgttt
atgtcagggctgagtgaggtgcagctcaatcacatggatgatcacactttaccagggaag
tatggtattggatttaccaacatggtagaacggacgacgccaagcagcaaggatctttcc
agtaaagaatttcgtgaaggaggacgtattctagtacagaaattacagaaatatcagcca
tgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaagaagtttttgga
gtaaaggttaagaacttggaatttgggcttcaaccccataagatcccagatacagaaact
ctctgctgtgttatgccatcgtccagtgcaaggtgtgctcagtttcctccagcccaggac
aaagtccattactatattaagctaaaggacttaagagaccagttgaaaggcattgaacgg
aatgcagacgttcaggaggtgcagtacatgtttgatctacagcttgcccaagaggatgca
aagaagatggcagttaaggaagaaaaatatgacccaggctatgaagcagcgtatggaggt
gcttacactgagcatctgggcaacagtgagccatgcaacttctctgaggacaggctaaca
gctgacagtgcagagttaagaggagaatcagcattcagtgacattccaaatgggcagtgg
atgacccagtcgtttacagaccagattccttcctttaataatcactgtggaaaactggag
cagggggaagggaaccctgcttaa
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